Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3 291 1e-73 >seq3 Length=8783590 Score = 291 bits (322), Expect = 1e-73 Identities = 577/842 (69%), Gaps = 19/842 (2%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| |||| ||||| ||||| | ||| ||| ||||||| Sbjct 2692965 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 2692906 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 |||||||| || |||| ||| | | ||| |||||| | ||||| || | || Sbjct 2692905 TCCAAGGATCTCCACGACTGGAACAACCGTCTGACTGCAGATGAGCAGTTCTTCGTCTCC 2692846 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197 ||||| | || ||||| || | ||| ||||| ||||||||||| || || ||||| || Sbjct 2692845 CACATCCTCGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTTGTTGAG-CG 2692787 Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256 |||| | ||| | ||||| |||| ||| ||||| ||||| ||||| ||||||| Sbjct 2692786 ATTCAGTGGCGAGGTCCAGATTCCCGAGGC-TCGATGCTTCTACGGTTTCCAGATCATGA 2692728 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCC-G 125315 | |||||| | ||||| || | ||||| ||| ||||||| ||||| || || | Sbjct 2692727 TGGAGAACATCCACTCCGAGACATACTCCCTACTCATTGACACCTACATCAAGGAGCCTG 2692668 Query 125316 CAACGTAAACACATGC-TCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGC 125374 | | || |||| | |||| ||||| || ||||| | || | || || || ||||| Sbjct 2692667 C--CCAAAGAACATACCTCTTCAACGCCATTGACACTATTCCTTGCATCCGAAAGAAGGC 2692610 Query 125375 TCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGC 125434 | | |||| ||||| |||||| | ||| | | || || | || | | || || || Sbjct 2692609 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGC 2692550 Query 125435 ATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAA 125494 || || ||||| ||||| |||||||| ||| ||||| | || || |||||||| Sbjct 2692549 CTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATTTTCTGGCTCAA 2692490 Query 125495 GAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGG 125554 |||||| || |||||||| || ||||| | |||||| | || ||||| |||||||| Sbjct 2692489 GAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 2692430 Query 125555 CCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGATC 125614 || ||| |||||||||| || || | ||| || | | || | | | Sbjct 2692429 TCTTCACACTGACTTTGCCTGCCTCCT------CCACTCTCACCTT---AAGGGACGTGC 2692379 Query 125615 CAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCT 125674 |||| | | | | || |||| | ||||||||||| | || || || ||||| || Sbjct 2692378 CAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGGAGTTCCT 2692319 Query 125675 AACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAGTACA 125733 || || | || || | || | | |||||||||| ||| || ||| |||||| Sbjct 2692318 TACTGAGGCTCT-CCCTTGTGCTCTTCTGGGCATGAACTCCAACCTCATGAAGCAGTACA 2692260 Query 125734 TAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCAAGATTTACAACGCCA 125793 | |||||||| || |||||||| || | | | | ||| | ||||| || | Sbjct 2692259 TCGAGTTTGTCGCTGATCGTCTGCTCGTTGCTCTCGGTAACGAGAAGGTGTACAAGGCTA 2692200 Query 125794 AGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGA 125853 || ||||| || |||||| | ||| || || | || ||||||||||||||||||| Sbjct 2692199 CAAACCCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTTTTCGAGA 2692140 Query 125854 AG 125855 || Sbjct 2692139 AG 2692138 Score = 120 bits (132), Expect = 5e-22 Identities = 313/475 (66%), Gaps = 8/475 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | || ||||| | || ||||||||||| || Sbjct 3510921 CAGGGTGGTAACAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCTTGGCACGCCGAT 3510862 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || | || | || || || || ||||||| || || | ||| Sbjct 3510861 GTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAAGAGGTCCGCGCTCGTGAC 3510802 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||| || || ||| | || ||| | || |||||||| ||| | | ||| | Sbjct 3510801 CTGTTCCTGGCTCTTTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGAACGGCGAA 3510742 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| || ||||||||| || || || || ||| | || |||| || || |||||| Sbjct 3510741 TGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTACGGTGACGAGTTT 3510682 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGCACG- 97174 ||||| |||| | |||||| |||||| || | | | |||| || | | Sbjct 3510681 GAGGCTCTGTACGAGAAGTACGAGAGAGAGGG----TAAGGGTCGCAAGTCTATCAAGGC 3510626 Query 97175 --AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231 |||| || ||| | |||||| | ||| ||| |||||| |||| || | ||| || Sbjct 3510625 CCAGAAGCTTTGGTACGCCATCCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATGCT 3510566 Query 97232 CTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 |||||||||| | || ||||| ||||||||| || | || ||||| |||| Sbjct 3510565 CTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATTCGAAGCTC 3510506 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346 ||| || ||||| || || | |||||| | | || || ||| || |||||| Sbjct 3510505 CAACCTTTGCACCGAGATCATTGAGTACTGCGCCCCTGATGAGGTTGCTGTTTGC 3510451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741057523353560