Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 5e-11 >seq1 Length=11790407 Score = 82.4 bits (90), Expect = 5e-11 Identities = 142/205 (69%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 25388 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTA 25447 ||| ||| || ||||| | ||| || ||| ||| || | || |||||||| ||||| Sbjct 2504004 GGGGAAGTTTCGCGGCTCACGCTCAAGTTGAACCTTGAGGGCGTCAACGTGATCGAGGTA 2504063 Query 25448 GACGTGAGCGTCTCCCAGAGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGC 25507 || ||||| || |||| ||| || ||| || | ||| | |||| || Sbjct 2504064 CACATGAGCATCACCCATGACATGGGTAAGGCTTCCAGGGACCAGCTCACATACGTGCGC 2504123 Query 25508 CATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATGTC 25567 |||||||| || || || ||||||||| ||||| ||||| || |||| ||||| || Sbjct 2504124 CATCATGTGTGTTAGCAGCGCGTAGCTGGCAATGTTGAAGGGGACGCCGAGACCCATATC 2504183 Query 25568 CCCCCGACCTCTGGTAGAGCTGACA 25592 | || || |||||||||||||| Sbjct 2504184 GCAT-GATCTTTGGTAGAGCTGACA 2504207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340136849677713