Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=9166667 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || | || || |||| ||||| || |||||||||||||| || Sbjct 2678285 ATCCTCAAGCTGCTTGCCAGCGAAAATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTT 2678344 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || | ||||||| | ||| ||||||| || || || | ||||| Sbjct 2678345 ATCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGAT 2678404 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || || || || || || ||||||||||| Sbjct 2678405 GGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 2678440 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 |||||| ||||| || || ||||||| | || ||||| || |||||||||||||| || Sbjct 2678003 ATCCTCAAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGAATACCTTCCTT 2678062 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || | ||||||| | ||| ||||||| || || || | ||||| Sbjct 2678063 ATCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGAT 2678122 Query 94972 GGTTTTTCCAGTAAGAGTTTTCAC 94995 ||| || |||||||| || || || Sbjct 2678123 GGTCTTGCCAGTAAGGGTCTTGAC 2678146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290185741160