Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 154 2e-32 >seq3 Length=8783590 Score = 154 bits (170), Expect = 2e-32 Identities = 363/544 (67%), Gaps = 8/544 (1%) Strand=Plus/Plus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||| ||||||||||| | | || || |||||||| || || || || ||||| ||||| Sbjct 2692423 GTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGGCC 2692482 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 |||||| || ||||| || || || || || | || |||||||| || || || || Sbjct 2692483 ACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGC 2692542 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGTATCCA-CTTTTGAG 33493 ||||||||||| ||| | | || | || | |||| || ||||| | || | Sbjct 2692543 AGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTGGATCCATCGAATG-G 2692601 Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553 |||| || ||||||||| | ||||| || || || ||||| || ||||| || || Sbjct 2692602 CCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGAGGTATGTTC 2692661 Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613 ||| | || || | || || || || | || || | || || || |||| Sbjct 2692662 TTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGGAGTGGATGT 2692721 Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673 | || || ||||| || |||||||| |||| |||||||| |||||| || || || Sbjct 2692722 TCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGAATCTGGACCTCGCCAC 2692781 Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733 ||||| || | | || || || || || || ||| ||| || || || || | | Sbjct 2692782 TGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAAGCGAGGA 2692841 Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTT 33790 || | || | | || |||| || | | || ||||| || | || ||| | Sbjct 2692842 TGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTCGTGGAGATCCT 2692901 Query 33791 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCC 33850 | || | ||| | || || ||||||| || || ||||||||||| || ||||| | || Sbjct 2692902 TGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGTACATCTGCC 2692961 Query 33851 AGAT 33854 |||| Sbjct 2692962 AGAT 2692965 Score = 131 bits (144), Expect = 2e-25 Identities = 404/617 (65%), Gaps = 6/617 (1%) Strand=Plus/Plus Query 63168 CCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATA 63227 ||||| || || | || ||||| | | ||| || |||| | || || || |||||| Sbjct 3510710 CCAGGGCACTCGTTGGGGCACATGAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATA 3510769 Query 63228 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCT 63287 || |||||||| ||||||||||| | || || || | | | || || || || Sbjct 3510770 AAAAGATCAGGGATCCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCG 3510829 Query 63288 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 63347 ||||||| ||||| |||||| | | | ||| | ||||| || || | ||| || Sbjct 3510830 TGATTCTTTCGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATA 3510889 Query 63348 GCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAA 63407 || | | ||||| || ||||| || ||||| || | || | ||| |||||||| | Sbjct 3510890 GCGAATGCACCAGGTCGCTTGTTACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAG 3510949 Query 63408 ACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCA 63467 || | | ||| |||| || |||||| || |||| ||||| |||| ||| || ||| Sbjct 3510950 ACACGTAGCATGGGAACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCA 3511009 Query 63468 CTGGCACGAATATTACTAATTGAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGC 63526 ||||||| || | | | | | | || || || || ||||| ||||| || | || Sbjct 3511010 GTGGCACGGAT-TCGGTGAACGTTCAAGCCAATACCACCAGCCATCTTAGAAATCATGGC 3511068 Query 63527 GCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAA 63586 || || | || || |||||||| || ||||| || || |||| | || || || Sbjct 3511069 ACAAGTCTTGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAA 3511128 Query 63587 ACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGT 63646 || |||| || | || || || || || |||| || || ||||| || || Sbjct 3511129 GCATGAGGACAGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGT 3511188 Query 63647 AAACCATTTTTCAGAAAGTAGATTGTACGTCT-CAATAGCTGAGTCTATATC-CCATTGA 63704 || | || || | || ||||| |||| ||| | || || | ||| || Sbjct 3511189 GAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAAGACACGA-TCGACATCGTCACCCC 3511247 Query 63705 TGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTT 63764 | || || || || |||||||| | ||| |||||||| | ||| | || ||| || Sbjct 3511248 AG-ATACCAACAGCAACACGCATGATCATATGCTGAGGACGCTCAGCAATTTTGCCGTCA 3511306 Query 63765 ATTTTCAACAAGTAGGA 63781 || ||||| || ||||| Sbjct 3511307 ATATTCAATAAATAGGA 3511323 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945790581960