Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq3 428 1e-114 >seq3 Length=8783590 Score = 428 bits (474), Expect = 1e-114 Identities = 1160/1745 (66%), Gaps = 54/1745 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| ||| || || ||||||||| | |||||||||||| |||||||| | ||| Sbjct 3511296 ATTGCTGAGCGTCCTCAGCATATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGACGAT 3511237 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT---GCTCGTGTATTCACGCACGCC 363558 || ||| | | || ||||| || || | || || || | ||||| || || Sbjct 3511236 GTCGATCGTGTCTTGGAGACATACAACCTCAT--GTCCAGCAAGT-TCTTCACTCATGCT 3511180 Query 363559 ACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTA 363618 | || ||| | | ||| ||||| || | | | || ||| |||| || ||||| ||| | Sbjct 3511179 TCCCCCACACTATTCAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTT 3511120 Query 363619 AAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATT 363678 | |||||||| || ||| || ||||||| || || || |||| |||||| | ||| Sbjct 3511119 GATATGAAGGAGGACAGCATTGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATT 3511060 Query 363679 TCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736 || |||| || || || ||||| | | || || | | | ||||| || | | || Sbjct 3511059 TCTAAGATGGCTGGTGGTATTGGCTTGAACGTTCACCGAA-TCCGTGCCACTGG-CTCTT 3511002 Query 363737 ACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||| ||| || || |||| | || || | ||||||||||| ||||| || | Sbjct 3511001 ACATCGCCGGAACCAACGG-TACTTCTAACGGTGTTGTTCCCATGCTACGTGTCTTCAAT 3510943 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || ||||| | || |||||||||||||| ||||| || || || ||||| || Sbjct 3510942 AACACTGCTCGTTATGTCGACCAGGGTGGTAACAAGCGACCTGGTGCATTCGCTATCTAC 3510883 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAA- 363913 || |||||| || |||||| | || ||||| ||||| ||||| || || ||||| || Sbjct 3510882 CTTGAGCCTTGGCACGCCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAG 3510823 Query 363914 -AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATG 363972 |||||| | || || ||||| |||||| || |||||| | |||| | ||||||| Sbjct 3510822 GAAGAGG---TCCGCGCTCGTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTTATG 3510766 Query 363973 AAGCGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTC 364030 ||||| || ||| | | | | | ||| | ||| | ||||| |||| || || || | Sbjct 3510765 AAGCGTGTCGAG--AAGAACGGCGAATGGACTCTCATGTGCCCCAACGAGTGCCCTGGCC 3510708 Query 364031 TTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAA 364090 | | || | |||||||| | || ||||| ||||| ||||| || ||||| | Sbjct 3510707 TGGCTGACTGCTACGGTGACGAGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTA 3510648 Query 364091 AGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTG 364150 ||| ||| ||| | || || |||||||| |||| |||||| | || | |||| | Sbjct 3510647 AGGGTCGCAAGTCTATCAAGGCCCAGAAGCTTTGGTACGCCATCCTTGAGGCCCAGACAG 3510588 Query 364151 AGACAGGAACACCCTAT-ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAG 364209 |||| |||| ||||| | ||| | ||||| ||| |||||||||||| |||||| || Sbjct 3510587 AGACCGGAA-ACCCTTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAG 3510529 Query 364210 CACCTTGGTACAATTCAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 |||||||||| |||| | || |||||| || |||||||| ||||| ||| ||| || Sbjct 3510528 AACCTTGGTACCATTC-GAAGCTCCAACCTTTGCACCGAGATCATTGAGTACTGCGCCCC 3510470 Query 364269 CGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------A 364322 || ||| ||| || || |||||||| || | | || || | || | | | Sbjct 3510469 TGATGAGGTTGCTGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATTAATTATGA 3510410 Query 364323 AGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAAT 364380 ||||| | || ||| | || | ||| | || || || | || | | | |||| Sbjct 3510409 AGATGCTTGTTACGACTTCAAGAAGCTTCACGATGTCACTCAAGTCGTTGTCC--GCAAC 3510352 Query 364381 CTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTA 364435 | ||||| ||||||| || | || || | | ||||| || ||| | Sbjct 3510351 TTGAACAAGATTATCGATGTAAACCACTACCCTGTGCAAGAAGCTCGCAACAGC-----A 3510297 Query 364436 ATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGC 364495 | |||||||| || || |||||||||||||| || || |||||||| | || | | Sbjct 3510296 ACATGCGTCACCGACCCATTGGTCTTGGTGTTCAAGGTCTCGCTGATGCCTTCCTTGCAC 3510237 Query 364496 TCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAA 364555 || ||| | ||||| || ||||| ||||||| || || ||| | ||||| || || | Sbjct 3510236 TCCGCATGCCCTTTGAGTCTCCTGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACCA 3510177 Query 364556 TGTATTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCT 364614 | || || || | || | || |||| | | || || |||| ||||| Sbjct 3510176 TCTACCACGCTGCTCTTACCACCTC-TGTGCAGCTCGCCAAGGAGGAGGGCCCCTACTCC 3510118 Query 364615 ACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACG 364674 |||| |||| || ||| ||| |||| | |||||||||| | |||||||||| Sbjct 3510117 ACTTTCAAGGGCTCTCCTGCCTCGGAGGGTATTCTCCAGTTTGACATGTGGAATGTCAAA 3510058 Query 364675 CCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGC 364734 || |||| || ||| ||||||| | || || | ||||||| ||| |||| ||| Sbjct 3510057 CCCTCTGACCTTTGGGACTGGGAATCCCTCCGGGAGGATGTTAAGACGCACGGTATCCGC 3509998 Query 364735 AAC--TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAAC 364791 ||| || |||||| || || ||||| || || || | ||||| || || ||| Sbjct 3509997 AACAGTCTACTCGTT---GCTCCTATGCCTACTGCCAGCACGTCGCAGATTCTTGGCAAC 3509941 Query 364792 AACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAA 364851 |||||||||||||| || | || ||| | || |||||| || ||| | || ||| Sbjct 3509940 AACGAGTGCTTCGAGCCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAA 3509881 Query 364852 TTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGAC 364911 || | ||| || || | || | ||||||||| |||| || || ||| || Sbjct 3509880 TTCCAGGTTGTCAACCCCTGGCTTCTGAAGGATCTTGTCGACATGGGTCTTTGGTCCGAT 3509821 Query 364912 AGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCA 364971 ||||||||| ||||| || | ||| |||||| | |||||||| || | || Sbjct 3509820 GCTATGAAGAACCGCATCATTGCTGATAACGGTTCTATCCAGAACATCCCCAACATCCCT 3509761 Query 364972 GAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGAT 365031 | ||| | || || | ||||| || || ||||| ||||| |||| | | | Sbjct 3509760 GCCGATGTCAAAGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAA 3509701 Query 365032 ATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACT 365091 ||||| || || || ||||| ||||| |||| ||| || | ||| | ||||| Sbjct 3509700 ATGGCTGCGGACCGTGGTGCCTTTATTGATCAGTCCCAATCTCTCAACATTCACATGAAG 3509641 Query 365092 CAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAG 365151 | || ||| | ||| | || ||||| ||| || ||||| |||||| ||| Sbjct 3509640 GACCCTACCATGGGTAAGATCACCAGTATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAG 3509581 Query 365152 ACAGG 365156 || || Sbjct 3509580 ACTGG 3509576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350577441542