Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 4e-13 seq2 86.0 5e-12 >seq3 Length=8783590 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||| || ||| | | ||| Sbjct 6944334 AGGACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 6944393 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || ||| | ||||| ||||| |||||| || | |||||| ||||| Sbjct 6944394 TCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 6944453 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | |||||| | |||| || | |||||| || Sbjct 6944454 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 6944513 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || || || || || ||||| ||||||||||| Sbjct 6944514 TTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 6944545 >seq2 Length=9166667 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | ||| || || ||||||||||| || |||||||||| | ||| ||||| Sbjct 2678457 AGGACGAGATGGAGGGTTGACTCCTTTTGGATATTGTAGTCGGAGAGGGTACGACCGTCC 2678516 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| || |||| | ||||| ||||| ||| | ||| || ||||| Sbjct 2678517 TCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 2678576 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||| || | | | | ||| || || |||| || | ||||||||| Sbjct 2678577 TGAATCTTGGACTTGACATTGTCGATAGTATCAGAGGACTCCACCTCAAGGGTGATGGTC 2678636 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || || ||||| Sbjct 2678637 TTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 2678668 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087106401190