Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq3 331 2e-85 >seq3 Length=8783590 Score = 331 bits (366), Expect = 2e-85 Identities = 595/854 (70%), Gaps = 18/854 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| ||||||||||| || || Sbjct 2692965 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 2692906 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAAC----GAAAAGTTTTTCCTCAA 42415 ||||||| || |||| | || |||||| | || |||| ||| || Sbjct 2692905 TCCAAGGATCTCCACGACTGGAACA-ACCGTCTGACTGCAGATGAGCAGTTCTTCGTCTC 2692847 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || |||||||| |||||||| || || ||||| |||||||| | | Sbjct 2692846 CCACATCCTCGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTTGTTGAGCG 2692787 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| ||||| || ||||||||||| |||||||| || Sbjct 2692786 ATTCAGTGGCGAGGTCCAGATTCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGAT 2692727 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||| ||| ||| || ||| | |||| |||||| ||| || | Sbjct 2692726 GGAGAACATCCACTCCGAGACATACTCCCTACTCATTGACACCTACATCAAGGAGCCTGC 2692667 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 | | | | || ||||| ||||| || || || || |||||| |||||||| || Sbjct 2692666 CCAAAGAACATACCTCTTCAACGCCATTGACACTATTCCTTGCATCCGAAAGAAGGCTGA 2692607 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 |||||| | |||||| || ||| | | || | | | || || ||||| Sbjct 2692606 CTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGCCTT 2692547 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | | ||||| ||||| ||||||||| || ||||| ||||| || |||||||||||| | Sbjct 2692546 TGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATTTTCTGGCTCAAGAA 2692487 Query 42776 GAA-GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGC 42834 | || || ||||| || || |||||||| ||||| |||||| | |||||||| | Sbjct 2692486 GCGTGGCCTC-ATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTC 2692428 Query 42835 TGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACC-TCAGGCACAAGCCCTCGAAG 42893 | || | ||||||||||||||||| ||| |||| | ||| || ||| | ||| Sbjct 2692427 TTCACACTGACTTTGCCTGCCTCCTCCACTC---TCACCTTAAGGGACGTGCCAGC-AAG 2692372 Query 42894 GAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAG 42953 || | ||| || ||||||||| || ||||| || ||| |||||||||| || || Sbjct 2692371 CAGATGATCCAGGACATCATCACCGATGCCGTTACCATTGAGCAGGAGTTCCTTACTGAG 2692312 Query 42954 TCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTA 43012 | || ||| ||| | || | ||||||||| | |||||||| |||||||| ||| Sbjct 2692311 GCTCT-CCCTTGTGCTCTTCTGGGCATGAACTCCAACCTCATGAAGCAGTACATCGAGTT 2692253 Query 43013 CGTCGCCGACCATCTCCT-GTGCCAGATGGGTCTC-AGCCGCCTCTACAACACGCCGTGC 43070 ||||| || | ||| || || | | ||| | || | | ||||| | | | Sbjct 2692252 TGTCGCTGATCGTCTGCTCGTTGC-TCTCGGTAACGAGAAG-GTGTACAAGGCTACAAAC 2692195 Query 43071 CCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGC 43130 ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct 2692194 CCCTTCGACTTCATGGAGAACATCTCTCTGGGTGGCAAGACCAACTTTTTCGAGAAGCGC 2692135 Query 43131 GTCGCCGACTACCA 43144 || ||||||||||| Sbjct 2692134 GTTGCCGACTACCA 2692121 Score = 320 bits (354), Expect = 3e-82 Identities = 885/1345 (66%), Gaps = 45/1345 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| || || || | || || ||||| ||||||| |||| | || || Sbjct 3509866 GTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGG 3509925 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| ||||||| || ||||||| |||||| ||||| ||||| || | || Sbjct 3509926 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGCAAC 3509985 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || |||||||| | | |||||| ||| | | ||| | ||||||||| Sbjct 3509986 GAGTAGACTGTTGCGGATACCGTGCGTCTTAACATCCTCCCGGAGGGATTCCCAGTCCCA 3510045 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 | | | ||||| |||||| ||||||||||||||| || | |||| Sbjct 3510046 AAGGTC--AGAGG-------GTTTGACATTCCACATGTCAAACTGGAGAATACCCTCCGA 3510096 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCT 244388 | | || ||||| | | || | |||||| || || || ||| |||| |||| | Sbjct 3510097 GGCAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCCTTGGCGAGCTGCACAGAGGT 3510156 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 || || || |||| |||||||||||||||||| |||||||| || || |||| Sbjct 3510157 GGTA-AGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCT--- 3510212 Query 244449 CGCAGGTGA-----AGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCC 244503 |||| || |||| |||| | | |||| | || || || || || || || Sbjct 3510213 --CAGGAGACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCAGCGAGACCTTGAACACC 3510270 Query 244504 GATGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTT 244563 | || ||||||| ||| ||| ||||| | ||||| |||| ||||| ||| Sbjct 3510271 AAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCTTCTTGCACAGGGTAGTGGTT 3510330 Query 244564 GCCGTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTG 244623 | ||||| | |||||| | ||||||| | | | ||| ||| ||| || Sbjct 3510331 TACATCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACATCGTGAAGCTTCTT 3510390 Query 244624 AAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGAC 244683 |||||||| | | ||| || | ||| | || | || | | Sbjct 3510391 GAAGTCGTAAC---AAGCATCTTCATAATTAATGA-----AAGAAGGC----AGAGACAA 3510438 Query 244684 GCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCA 244743 | ||| |||||||| || || ||||| || | | | ||||| | ||||||||||| Sbjct 3510439 GGAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCA 3510498 Query 244744 GAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTC 244803 ||||| || ||||| || |||| || || ||| |||| ||||||| || Sbjct 3510499 AAGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 3510558 Query 244804 CTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAG 244863 ||||||||||||||| || |||||||| |||||| | |||| | || ||| || Sbjct 3510559 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAAG 3510618 Query 244864 GTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGC 244923 | | ||||||| | | ||||| |||| |||||| |||||| |||||| || Sbjct 3510619 CTTCTGGGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGC 3510678 Query 244924 CTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACT 244983 ||| |||||| || || || | ||||| |||||| |||||||||||| | Sbjct 3510679 CTCAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGT 3510738 Query 244984 CCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAA 245043 ||| |||||| | || ||| | || ||| || || || |||||||| || ||| |||| Sbjct 3510739 CCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGGAA 3510798 Query 245044 GAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTG-TTCTTCCTCAGCTCCAAAAAGTCAA 245102 ||||| | | | ||| ||| || ||| ||||| | || || | || || | Sbjct 3510799 CAGGTCACGAGCGCGGACCTCTTCCTTACC-GTGATTCTTTCGGAGATCAAGGAACTCGA 3510857 Query 245103 AGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTC 245162 |||| ||| ||||||| ||||| | ||||| ||||| || || || |||||||| || | Sbjct 3510858 AGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTACCAC 3510917 Query 245163 CCTGGTCCACCATCCTCTCGAGC-GCG---TTGAAGATGCGCAGGGTAGGCACTATGCCG 245218 ||||||| | | | ||||| | | ||||||| || || | || || | ||| Sbjct 3510918 CCTGGTCGA----CATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCG 3510973 Query 245219 TTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTG-ATGGA 245277 ||||| |||||||| || |||||| | ||| || | | || | | || | | Sbjct 3510974 TTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGA-TTCGGTGAACGTT 3511032 Query 245278 CATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTAT 245337 || ||| | || || || ||| || || | ||| || |||||| ||| || || Sbjct 3511033 CAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGAT 3511092 Query 245338 GCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397 || || ||||||||| |||||| | | || ||||| ||||||||||| |||| || Sbjct 3511093 ACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGG 3511152 Query 245398 GCTGCACGAGTTGAACAGAGTGGGG 245422 | | | | |||||| || |||||| Sbjct 3511153 GGTACCAGCGTTGAATAGTGTGGGG 3511177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337063432560