Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3 201 1e-46 >seq3 Length=8783590 Score = 201 bits (222), Expect = 1e-46 Identities = 1085/1713 (63%), Gaps = 77/1713 (4%) Strand=Plus/Plus Query 113588 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 113647 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 3509552 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 3509611 Query 113648 ATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 113707 || || | ||| | || || | |||| | ||| | | |||||| ||| Sbjct 3509612 ATACTGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGATTGGGACTGA 3509671 Query 113708 TCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 113764 || || ||| ||||| ||||| ||||| | |||| ||| || || ||| Sbjct 3509672 TCAATAAAGGCACCACGGTCCGCAGCCATTTG---CACAACCTGTCGCTGAGAAATCTCC 3509728 Query 113765 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAG 113824 |||||||| |||| || || | ||| | ||||| | ||| || ||||| || Sbjct 3509729 CACACAGTCTTGTACAGAGCTTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 3509788 Query 113825 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 113881 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 3509789 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 3509845 Query 113882 AGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 113941 ||||||| || || |||||||| || || || || ||| || | | Sbjct 3509846 AGATCCTTCAGAAGCCAGGGGTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGG 3509905 Query 113942 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAG 114001 ||||| |||| ||||| ||||| |||||||| ||||| || | || || | ||| | Sbjct 3509906 TAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTG 3509965 Query 114002 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 114061 || || ||||| || || | ||| || ||||| |||| ||| | | ||| ||| Sbjct 3509966 GCAGTAGGCATAGGAGCAACGAGTAGACTGTTGCGGATACCGTGCGTCTTAACATCCTCC 3510025 Query 114062 TTGAGGGCGTCCCAGTCGTA---GTT-GAGC-TTTGTCTCCCCCTGCCACATATCAAACT 114116 ||||| |||||||| | || ||| |||| | | |||||| ||||||| Sbjct 3510026 CGGAGGGATTCCCAGTCCCAAAGGTCAGAGGGTTTGACA-----TTCCACATGTCAAACT 3510080 Query 114117 GGAGGATACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCG 114176 |||| ||||| | ||||| || || |||| || || ||| |||||||| ||| | Sbjct 3510081 GGAGAATACCCTCCGAGGCAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCCTTGG 3510140 Query 114177 CCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCAT 114233 | | | | ||| | | || || ||||| || || ||||| || || | | Sbjct 3510141 CGAGCTGCACAGAGGTGGTA---AGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGT 3510197 Query 114234 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 114293 ||| | ||||| || ||||| | | ||| || || |||| |||| Sbjct 3510198 TCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCAGCGA 3510257 Query 114294 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA 114353 ||||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 3510258 GACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCTTCTTGCA 3510317 Query 114354 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTT-GTGA 114410 | || || || |||||||| | | || | || | |||||| ||| |||| Sbjct 3510318 CAGGGTAGTGGTTTACATCGATAATCTTGTTCAAGTT---GCGGACAACGACTTGAGTGA 3510374 Query 114411 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT------TGACATACTTAG 114464 || |||||||| | | | || ||| || ||||||| ||| | | || Sbjct 3510375 CATCGTGAAGCTTCTTGAAGTCGTAACA---AGCATCTTCATAATTAATGAAAGA---AG 3510428 Query 114465 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 114524 | || | | || || || || || |||| |||||| | |||||| || | Sbjct 3510429 GCAGAGACAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGA 3510488 Query 114525 TTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 114584 | || || || | || || || |||||| || | ||||||||| || ||| || Sbjct 3510489 TCTCGGTGCAAAGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGT 3510548 Query 114585 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 114644 | || ||||||||| |||||| | || | || ||||| || |||| || || || | Sbjct 3510549 TGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGG 3510608 Query 114645 CCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC---CTCG 114697 | | ||| | | || | | || | | | ||| || |||| |||| |||| Sbjct 3510609 CGTACCAAAGCTTCTGGGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCTCTCG 3510661 Query 114698 TACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTA 114757 ||||| ||| || || |||||||| ||||| | || | || || || || Sbjct 3510662 TACTTCTCGTACAGAGCCTCAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCG 3510721 Query 114758 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGG 114817 | ||||| | ||||| ||||| || || ||| ||||||||||| || || || ||| Sbjct 3510722 TTGGGGCACATGAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGG 3510781 Query 114818 ATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGC 114877 ||||| ||||| ||| || || ||| ||| | ||||| | || ||||| || Sbjct 3510782 ATCCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGG 3510841 Query 114878 AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCC 114937 | || | || || | || ||| |||||||| || || ||||| | |||| || || Sbjct 3510842 AGATCAAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACC- 3510900 Query 114938 TTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGC 114991 | | || |||| |||||| ||||| | || ||| ||| || || || ||| Sbjct 3510901 --AGGTCGCTTGTTACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACACGTAGC 3510958 Query 114992 ATTGGAATGATACCATCAGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTC 115049 || |||| | ||| | ||| || || | ||| ||| || ||| | | |||| | Sbjct 3510959 ATGGGAACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCC--AGTGGCAC 3511016 Query 115050 TGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCG 115109 || || | || || |||||||| || ||| ||| || || || || | Sbjct 3511017 GGATTCGGTGAACGTTCAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCT 3511076 Query 115110 TGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCG 115169 |||| | ||||||| ||||| || ||| |||| | | | ||||||||| | Sbjct 3511077 TGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGG 3511136 Query 115170 ACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATAC 115229 ||| || ||| || |||||||||||||| || || || | || || ||| | | Sbjct 3511137 ACAGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGA--AGAA 3511194 Query 115230 CTTG--GGACATCTTATCGTAGGTCTCCAAGAC 115260 |||| |||||| | ||| ||||||||||| Sbjct 3511195 CTTGCTGGACATGAGGTTGTATGTCTCCAAGAC 3511227 Score = 143 bits (158), Expect = 3e-29 Identities = 529/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 |||||| |||| ||||||||||| ||||| ||||| || ||| ||| |||||||| Sbjct 2692123 GTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCAT 2692182 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 125875 || || || ||||| | | || | | || | | ||| | | ||| ||| Sbjct 2692183 GAAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTACCGAGAGCAAC--GAGCAGA 2692240 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 ||||| | ||| |||| ||||||| ||| | |||||||| || | || | Sbjct 2692241 CGATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGAGCA 2692300 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || ||||| || || | |||| ||| |||||| ||||| || | |||| | Sbjct 2692301 CAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGATGTCC 2692360 Query 125996 TGAATGGTGTCCACCC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAAC 126052 || || | | | | || ||| || | || | || ||| || |||||| Sbjct 2692361 TGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCAAAG 2692417 Query 126053 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATG 126112 || ||| |||||||||||||| |||||||| || || |||||| ||| || |||||| Sbjct 2692418 TCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATG 2692477 Query 126113 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCC 126172 || || |||||||| | ||||||||| | ||| | ||| ||||||||| ||||| Sbjct 2692478 AGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCA 2692537 Query 126173 ACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTT 126231 || || || |||| ||||| | |||||| ||| | | | |||| | | ||| Sbjct 2692538 ACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAG-GAGTCCTTGTCCTGGATCCATCG 2692596 Query 126232 CATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTC 126291 || ||||| | ||||| || ||| || || | || | || || | ||||| | Sbjct 2692597 AATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGAGGTA 2692656 Query 126292 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 126351 | ||| | || || |||||||| | || |||||| || ||||| ||| ||| Sbjct 2692657 TGTTCTTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGGAGTG 2692716 Query 126352 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 126410 || | | ||| || | ||| | ||||||| | || || ||| ||||| |||| Sbjct 2692717 GATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGAATCTGGACCT 2692775 Query 126411 CATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 126469 | | | ||| | | | | ||||| || || ||||| || |||| || || Sbjct 2692776 C-GCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAA 2692834 Query 126470 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCA 126526 || ||||| | | ||| ||| |||| | ||| || | |||||||||| Sbjct 2692835 GCGAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTCGTGG 2692894 Query 126527 AGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||||||| || ||||| | |||||| || ||||| Sbjct 2692895 AGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 2692929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352248487480