Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3 102 9e-17 seq2 102 9e-17 >seq3 Length=8783590 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| || ||| || || | || || |||||||||||||| || Sbjct 6944354 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAA 6944413 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || |||||||||||||| | || | || |||||||||| ||| || |||| ||| Sbjct 6944414 GATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGA-CGT 6944472 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | |||||| || ||||| || | ||||| || || ||||| || ||||| | Sbjct 6944473 TGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTAAGGGTCTTGA 6944532 Query 42196 CAAAGATTTGCAT 42208 | || || ||||| Sbjct 6944533 CGAAAATCTGCAT 6944545 >seq2 Length=9166667 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 ||||||||| |||||||| || | || || || |||| || |||||||| || ||||| Sbjct 2678477 CTCCTTTTGGATATTGTAGTCGGAGAGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAA 2678536 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135 || | |||||||||||| | || | || ||||||||| ||| | || | |||| Sbjct 2678537 AATCAATCGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC-TGAATCTTGGACTTGACAT 2678595 Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | || || || ||||| || | |||||||| ||||| || || ||||| | Sbjct 2678596 TGTCGATAGTATCAGAGGACTCCACCTCAAGGGTGATGGTCTTGCCGGTGAGGGTCTTGA 2678655 Query 42196 CAAAGATTTGCAT 42208 | ||||||||||| Sbjct 2678656 CGAAGATTTGCAT 2678668 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || |||||||| || | || || || | || || |||||||| |||||||| Sbjct 2678249 CTCCTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCGAA 2678308 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | |||||||||||| | || | | ||||| ||| ||| || |||| ||| Sbjct 2678309 AATCAATCGCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGACTTGA-CGT 2678367 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| |||| |||||||| ||||| || || ||||| | Sbjct 2678368 TGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGA 2678427 Query 42196 CAAAGATTTGCAT 42208 | ||||| ||||| Sbjct 2678428 CGAAGATCTGCAT 2678440 Score = 89.7 bits (98), Expect = 6e-13 Identities = 130/181 (72%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | || || || | || || |||||||| ||||| || Sbjct 2677967 CTCCTTCTGAATGTTGTAGTCGGAAAGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAA 2678026 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 ||||||||||||||||| | || | | ||||| ||| ||| || |||| ||| Sbjct 2678027 GATGAGTCGCTGCTGGTCAGGAGGAATACCTTCCTTATCCTGGATCTTGGACTTGA-CGT 2678085 Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195 | | | ||||| || ||||| |||| |||||||| ||||| || || ||||| | Sbjct 2678086 TGTCGATGGTGTCAGAAGACTCCACCTCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGA 2678145 Query 42196 C 42196 | Sbjct 2678146 C 2678146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543211570981040