Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3 183 3e-41 >seq3 Length=8783590 Score = 183 bits (202), Expect = 3e-41 Identities = 491/743 (66%), Gaps = 6/743 (1%) Strand=Plus/Minus Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCT-GATG 93954 |||| || || |||||||| || ||||| ||| ||| |||| || || ||||| | || Sbjct 3511178 CCCCCACACTATTCAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTG 3511119 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | | |||| ||| ||| ||| || | ||| | ||||||| ||||| | || Sbjct 3511118 AT-ATGAAGGAGGACAGCATTGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATT 3511060 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || || || | | || ||| | ||||||| || || ||| Sbjct 3511059 TCTAAGATGGCTGGTGGTATTGGCTTGAACGTTCACCGAATCCGTGCCACTGGCTCTTAC 3511000 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| ||||| || || || ||||| | || || ||||| || |||||||| ||| Sbjct 3510999 ATCGCCGGAACCAACGGTACTTCTAACGGTGTTGTTCCCATGCTACGTGTCTTCAATAAC 3510940 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || |||||||||||| | | | ||| | ||||| |||| || Sbjct 3510939 ACTGCTCGTTATGTCGACCAGGGTGGTAACAAGCGACCTGGTGCATTCGCTATCTACCTT 3510880 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| || || | ||| | || || |||||||| ||||| || || Sbjct 3510879 GAGCCTTGGCACGCCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAA 3510820 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | || | ||||| ||| ||||| ||| | || || ||||||||||| || Sbjct 3510819 GAGGTCCGCGCTCGTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTTATGAAGCGT 3510760 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||||| ||| || |||| ||| | || ||||| || || || || ||| | ||| Sbjct 3510759 GTCGAGAAGAACGGCGAATGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGAC 3510700 Query 94375 GTTTGTGGATCGCG-TTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAG 94433 | || | || ||||| | |||| | ||||| |||| |||| | Sbjct 3510699 TGCTACGG-TGACGAGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTCG 3510641 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| ||| | || |||||| ||| | ||| | || | ||| ||||| || Sbjct 3510640 CAAGTCTATCAAGGCCCAGAAGCTTTGGTACGCCATCCTTGAGGCCCAGACAGAGACCGG 3510581 Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | || | ||| | | |||||| | ||| |||| |||| |||||| || |||| | Sbjct 3510580 AAACCCTTTCATGCTCTACAAGGATCACTG-CAACCGCAAGAGCAACCAAAAGAACCTTG 3510522 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | || ||||| || || ||||||||||| | ||||| | || || ||| Sbjct 3510521 GTACCATTCGAAGCTCCAACCTTTGCACCGAGATCATTGAGTACTGCGCCCCTGATGAGG 3510462 Query 94613 TTGCTGTGTGTAACCTGGGCTCC 94635 ||||||| || ||||| | |||| Sbjct 3510461 TTGCTGTTTGCAACCTTGCCTCC 3510439 Score = 134 bits (148), Expect = 1e-26 Identities = 262/384 (68%), Gaps = 10/384 (3%) Strand=Plus/Minus Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053 |||| ||| | ||||| ||| | ||| ||| || ||||| | || | ||||||||| Sbjct 3510092 AGGGTATTCTCCAGTTTGACATGTGGAATGTCAAACCCTCTGACCTTTGGGACTGGGAAT 3510033 Query 95054 CTCTACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGC 95113 | || || | ||||||| | |||||| | ||| || || || || || |||| Sbjct 3510032 CCCTCCGGGAGGATGTTAAGACGCACGGTATCCGCAACAGTCTACTCGTTGCTCCTATGC 3509973 Query 95114 CCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCA 95173 | || ||| |||| ||||||| |||||||||||||||| ||||| |||| |||||||| Sbjct 3509972 CTACTGCCAGCACGTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACACCTCCA 3509913 Query 95174 ACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCT-A 95232 || | ||| | | || || || || || ||||||| || ||||| || || | Sbjct 3509912 ACATCTACCAACGCCGAGTCCTTGCTGGCGAATTCCAGGTTGTCAACCCCTGGCTTCTGA 3509853 Query 95233 CGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACC----AACTGCTACG 95288 || | || || | ||||| | ||| || | ||||||| | |||| Sbjct 3509852 AGGATCTTGTCGAC-ATGGGTCTTTGGTCCGATGCTATGAAGAACCGCATCATTGCT--- 3509797 Query 95289 CGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAA 95348 | ||||| || ||||||||||||| | || || | || |||| || || ||||| Sbjct 3509796 -GATAACGGTTCTATCCAGAACATCCCCAACATCCCTGCCGATGTCAAAGCTCTGTACAA 3509738 Query 95349 GACCGTGTGGGAGATCCCGCAGCG 95372 ||| ||||||||||| | ||||| Sbjct 3509737 GACTGTGTGGGAGATTTCTCAGCG 3509714 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722080688760