Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq3 181 1e-40 >seq3 Length=8783590 Score = 181 bits (200), Expect = 1e-40 Identities = 1087/1719 (63%), Gaps = 87/1719 (5%) Strand=Plus/Plus Query 115549 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 115608 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 3509552 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 3509611 Query 115609 ATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 115668 || || | ||| | || || | |||| | ||| | | |||||| ||| Sbjct 3509612 ATACTGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGATTGGGACTGA 3509671 Query 115669 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 115725 || || ||| || || ||||| ||||| | |||| ||| || || ||| Sbjct 3509672 TCAATAAAGGCACCACGGTCCGCAGCCATTTG---CACAACCTGTCGCTGAGAAATCTCC 3509728 Query 115726 CACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAG 115785 |||||||| |||| || || | ||| | ||||| | ||| || |||||||| Sbjct 3509729 CACACAGTCTTGTACAGAGCTTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 3509788 Query 115786 CC---ACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTG 115842 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 3509789 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 3509845 Query 115843 AGATCCTCCA----CGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCT 115898 ||||||| || | ||| | |||||||| || || || || ||| || | Sbjct 3509846 AGATCCTTCAGAAGCCAGGGG----TTGACAACCTGGAATTCGCCAGCAAGGACTCGGCG 3509901 Query 115899 CAGATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGT 115958 | |||||||||| ||||| ||||| |||||||| ||||| || | || || | || Sbjct 3509902 TTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGT 3509961 Query 115959 GGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCG 116018 | ||| || ||||| || || | ||| || |||||||||| ||| | | ||| Sbjct 3509962 GCTGGCAGTAGGCATAGGAGCAACGAGTAGACTGTTGCGGATACCGTGCGTCTTAACATC 3510021 Query 116019 TTCCTTGAGGGCGTCCCAGTCGTA---GTT-GAGC-TTTGTCTCCCCCTCCCACATATCA 116073 ||| ||||| |||||||| | || ||| |||| | | |||||| ||| Sbjct 3510022 CTCCCGGAGGGATTCCCAGTCCCAAAGGTCAGAGGGTTTGACA-----TTCCACATGTCA 3510076 Query 116074 AACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACC 116133 |||||||| ||||| | || || || || |||| || || || |||||||| || Sbjct 3510077 AACTGGAGAATACCCTCCGAGGCAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCC 3510136 Query 116134 TCCGCCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGA 116190 | || | | | ||| | | || || ||||| || || ||||| || || | Sbjct 3510137 TTGGCGAGCTGCACAGAGGTGGTA---AGAGCAGCGTGGTAGATGGTCTCGAAGATTTGC 3510193 Query 116191 GCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCC 116250 |||| | ||||| || ||||| | | ||| || || |||| Sbjct 3510194 TTGTTCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCA 3510253 Query 116251 GCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTC 116310 ||||||||||| ||||| || ||||| || || || | ||| || || ||||| Sbjct 3510254 GCGAGACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCTTCT 3510313 Query 116311 TCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTT- 116367 | ||| || || || |||||||| | | || | || | |||||| ||| Sbjct 3510314 TGCACAGGGTAGTGGTTTACATCGATAATCTTGTTCAAGTT---GCGGACAACGACTTGA 3510370 Query 116368 GTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT------TGACATAC 116421 |||| || |||||||| | | | || ||| || ||||||| ||| | | Sbjct 3510371 GTGACATCGTGAAGCTTCTTGAAGTCGTAACA---AGCATCTTCATAATTAATGAAAGA- 3510426 Query 116422 TTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCT 116481 ||| || | | || || || || || |||| |||||| | |||||| Sbjct 3510427 --AGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCA 3510484 Query 116482 ATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTT 116541 || || || || || | || || || |||||| || | ||||||||| || ||| Sbjct 3510485 ATGATCTCGGTGCAAAGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTG 3510544 Query 116542 GTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGA 116601 ||| || ||||||||||||||| | || | || ||||| || |||| || || Sbjct 3510545 CGGTTGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGG 3510604 Query 116602 ATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCT---CCTC--- 116654 || || | ||| | | || | | || | | | ||| || |||| |||| Sbjct 3510605 ATGGCGTACCAAAGCTTCTGGGCCTTGA----TAGACTTG---CGACCCTTACCCTCTCT 3510657 Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-CTCTGAGAGCCCTGGTG 116713 ||||||||| ||| || ||||||||||| ||| || ||| || | || || || Sbjct 3510658 CTCGTACTTCTCGTACAGAGCCTCAAACTCGTCA-CCGTAGCAGTCAGCCAGGCCAGGGC 3510716 Query 116714 CCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 116773 || | || || | ||||| ||||| || || ||| || |||||||| || || | Sbjct 3510717 ACTCGTTGGGGCACATGAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGAT 3510776 Query 116774 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 116833 | |||||||| || ||| ||| || || ||| ||| | ||||| | || ||||| Sbjct 3510777 CAGGGATCCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCT 3510836 Query 116834 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 116893 || | || | || || | || ||| |||||||| || || ||||| | |||| || Sbjct 3510837 TTCGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATG 3510896 Query 116894 -AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGC 116947 || | |||| |||| |||||| ||||| | || || || || || | Sbjct 3510897 CACCAGGTCGCTTG---TTACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACAC 3510953 Query 116948 GAAGCATTGGAATGATACCATCAGATTGGCCATTTG-TCCCCCGA-ATACGAGACTTGTT 117005 | ||||| |||| | ||| | ||| || || | ||| ||| || ||| | | Sbjct 3510954 GTAGCATGGGAACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCC--AGT 3511011 Query 117006 GGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCA 117065 ||| | || ||| | || || |||||||| || ||| ||| || || || || Sbjct 3511012 GGCACGGATTCGGTGAACGTTCAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACA 3511071 Query 117066 CTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCA 117125 | |||| | ||||||| || || || ||| |||| | | | |||||||| Sbjct 3511072 AGTCTTGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCA 3511131 Query 117126 GCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185 |||| || ||| || |||||||||||||| || || || | || || ||| Sbjct 3511132 TGAGGACAGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGA- 3511190 Query 117186 CATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACA 117222 | | |||| |||||| | ||| |||||||||||| Sbjct 3511191 -AGAACTTGCTGGACATGAGGTTGTATGTCTCCAAGACA 3511228 Score = 140 bits (154), Expect = 4e-28 Identities = 528/815 (65%), Gaps = 19/815 (2%) Strand=Plus/Plus Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290 |||||| | || ||||||||||| ||||| ||||| ||| | || ||| |||||||| Sbjct 2692123 GTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCAT 2692182 Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCAAA--TTGTTGGCACCCCAATCTGTTTGAGGAGA 127348 || || || ||||| | | || | | || | | ||| | | ||| ||| Sbjct 2692183 GAAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTACCGAGAGCAAC--GAGCAGA 2692240 Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408 ||||| | ||| |||| ||||||| ||| | |||||||| || | || | Sbjct 2692241 CGATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGAGCA 2692300 Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468 || ||||| || || | |||| ||| ||||||| || || || | |||| | Sbjct 2692301 CAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGATGTCC 2692360 Query 127469 TGAATAGTGTCCACCC---CAGGTCTATTGCGTAAAGTCTTGAAGAGTTCCACAGCAAAC 127525 || || | | | | || ||| || | || | || ||| || ||||| Sbjct 2692361 TGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGG--CAG-GCAAAG 2692417 Query 127526 TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATG 127585 || ||| |||||||||||||| |||||||| || || |||||| |||||| |||||| Sbjct 2692418 TCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATG 2692477 Query 127586 AGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCC 127645 || || |||||||| | ||||||||| | ||| | || ||||||||| ||||| Sbjct 2692478 AGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCA 2692537 Query 127646 ACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTT 127704 || || || |||| ||||| | ||||| ||| | | | |||| | | ||| Sbjct 2692538 ACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAG-GAGTCCTTGTCCTGGATCCATCG 2692596 Query 127705 CATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTC 127764 || ||||| | ||||| || ||| || || | || | || || | ||||| | Sbjct 2692597 AATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGAGGTA 2692656 Query 127765 CTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTG 127824 | ||| | || || |||||||| | || |||||| || ||||| ||| ||| Sbjct 2692657 TGTTCTTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGGAGTG 2692716 Query 127825 GACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCT 127883 || | | ||| || | ||| | ||||||| | || || ||| ||||| |||| Sbjct 2692717 GATGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGAATCTGGACCT 2692775 Query 127884 CATCGGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAAC 127942 | | | ||| | | | | ||||| || || ||||| || |||| || || Sbjct 2692776 C-GCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAA 2692834 Query 127943 GCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCG 127999 || ||||| | | ||| ||| |||| | ||| || | |||||||||| | Sbjct 2692835 GCGAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTCGTGG 2692894 Query 128000 AGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||||||| || ||||| | |||||| || ||||| Sbjct 2692895 AGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 2692929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613505811939960