Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 192 9e-44 >seq3 Length=8783590 Score = 192 bits (212), Expect = 9e-44 Identities = 358/519 (69%), Gaps = 9/519 (2%) Strand=Plus/Plus Query 159649 CTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGATTCCATGAACCCGAATGGGTT 159708 |||||||||||||||||||||||| ||| || || |||||||| |||| ||||| Sbjct 2692138 CTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCATGAAGTCGAAGGGGTT 2692197 Query 159709 CTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAGCAACCTGTCTGCCACAAATTC 159768 | | | || |||| |||||||| | |||| | || || ||||| || Sbjct 2692198 TGTAGCCTTGTACACCTTCTCGTTACCGAGAGCAACGAGCAGACGATCAGCGACAAACTC 2692257 Query 159769 GATGTAGCTACA-CATCTGCTCACAGTTGATCCCCAGCAGCCTAACGGGGAGCGCTTCCG 159827 |||||| || | ||| | | |||| || ||||| || | ||||| || || | Sbjct 2692258 GATGTA-CTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGAGCACAAGGGAGAGCCTCAG 2692316 Query 159828 ACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGA-CACGTTCGTAC 159886 || ||||||| |||||| || || ||||| | || | | || || | | | | Sbjct 2692317 TAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGATGTCCTGGATCATCTGCTTGC 2692376 Query 159887 CCCGGCTTG-CCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 ||| | ||| || ||| | | ||||||| |||||||| ||| || || Sbjct 2692377 T--GGCACGTCCCTTAAGGTGAGAGTGGA---GGAGGCAGGCAAAGTCAGTGTGAAGACC 2692431 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| |||||||||| ||||||||| | | | || || ||||||| |||||| || Sbjct 2692432 CTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAGGCCACGCTTCTT 2692491 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| ||||| | ||||| |||||||| || ||||| ||||| ||||| ||||| || Sbjct 2692492 GAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAACGGCAGCAAAGGC 2692551 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 || || | | | |||| |||| || |||| ||| |||| | ||||||| ||||| Sbjct 2692552 AACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTGGATCCATCGAATGGCCCAGTCAGC 2692611 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGTTAAA 160164 ||||||| |||||| || || || | |||||| || Sbjct 2692612 CTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAA 2692650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153400961360