Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 7e-12 >seq2 Length=9166667 Score = 87.8 bits (96), Expect = 7e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| || || || || || || || || || ||||| || || || Sbjct 2678671 ATCATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTTGAGGTGGAGTCC 2678612 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 ||||||| || || | | || || ||||| || |||||||| ||||||||||| Sbjct 2678611 TCTGATACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAAGGCATTCCTCCTGAC 2678552 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || || || |||||| | || || || ||||| || || | || | | || || Sbjct 2678551 CAGCAGCGATTGATTTTCGCCGGCAAGCAGCTTGAGGACGGTCGTACCCTCTCCGACTAC 2678492 Query 391227 AATATTGATAAGGATGCAACACTTCA 391252 ||||| | ||||| |||| || || Sbjct 2678491 AATATCCAAAAGGAGTCAACCCTCCA 2678466 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || || || || || || || ||| Sbjct 2678440 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCTTCT 2678381 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | || || || || ||||||||||| ||||||||||| || Sbjct 2678380 GACACCATCGACAACGTCAAGTCCAAGATCCAGGATAAGGAAGGTATTCCTCCTGACCAG 2678321 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || |||||| | || || || ||||| ||||| |||| | | || || ||| Sbjct 2678320 CAGCGATTGATTTTCGCTGGCAAGCAGCTTGAGGATGGCCGAACCCTTTCCGACTACAAT 2678261 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || || ||| Sbjct 2678260 ATCCAGAAGGAGTCGACCCTCCAC 2678237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975713818185548