Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3 197 2e-45 >seq3 Length=8783590 Score = 197 bits (218), Expect = 2e-45 Identities = 549/835 (66%), Gaps = 19/835 (2%) Strand=Plus/Plus Query 106478 TTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAA 106537 ||||||||||| |||||| | |||||| | || || || || | |||||| Sbjct 3510449 TTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCAAAGGTTGGAG 3510508 Query 106538 CTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGC 106597 || ||| || || | ||||||||||| ||||| |||||| ||||||||||||| Sbjct 3510509 CTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGC 3510568 Query 106598 ATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGC 106656 ||| | || | || ||||| ||||| | || || || || | ||| | | || | | | Sbjct 3510569 ATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAAGCTTCTGGGCC 3510628 Query 106657 -TGGTACAATGGCGTTGGCCCGT-CCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAAC 106714 || || | | || | ||| | ||||| ||||||||| ||| || || |||||| Sbjct 3510629 TTGATAGACTTGC---GACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCAAAC 3510685 Query 106715 TCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGA 106774 || ||||| ||| | || || || || || || || | |||| ||||| Sbjct 3510686 TCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCATTCG 3510745 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 || || ||| || |||||||| ||||| || || ||||| || | || || || Sbjct 3510746 CCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGGAACAGGTCA 3510805 Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 | | || ||||||| | ||| || || ||| | ||||||||||| | || ||| Sbjct 3510806 CGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACATCG 3510865 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGA------TAGATCCCTTTCGACGCCCAGCTTGA 106948 |||||||| |||||||| |||| |||| || || ||| | ||| | || Sbjct 3510866 GCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTA---CCACCCTGG 3510922 Query 106949 TTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGA 107008 | ||||| || || ||| || || || || ||||| |||| || ||| | || | Sbjct 3510923 TCGACATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCGTTAGAAGTA 3510982 Query 107009 CCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATA 107068 || || || || || ||| | |||| | | || | || || |||||| Sbjct 3510983 CCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTCAAGCCAATA 3511042 Query 107069 CCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATT 107128 || |||||| ||| || || ||||| | | || || | |||||||||| || Sbjct 3511043 CCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCAATG 3511102 Query 107129 GAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCA 107188 ||||||||| | | | ||||||||| ||||| ||| || || |||||||| Sbjct 3511103 CTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCG 3511162 Query 107189 TTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCT 107246 ||||| || || || | || ||| ||| | | |||| |||||| || |||||||| Sbjct 3511163 TTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACTTGCTGGACATGAGGTTGTATGTCT 3511220 Query 107247 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 |||||||| ||| | || || || ||| || | || |||||||| | ||| Sbjct 3511221 CCAAGACACGATCGACATCGTCACCCCAGATACCAACAGCAACACGCATGATCAT 3511275 Score = 120 bits (132), Expect = 4e-22 Identities = 527/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Plus Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045 ||||| |||| |||||||| || ||||||||||| ||| | || ||||| ||||| Sbjct 2692124 TAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCATG 2692183 Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGC-ACCCCAACTTGTTTGAGG 117099 ||||| || || || | || || | | | | | | | |||| ||| Sbjct 2692184 AAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTACCGAGAGCAAC------GAGC 2692237 Query 117100 AGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGA 117159 |||||||| | ||| |||| ||||||| ||| | |||||||| || | ||| Sbjct 2692238 AGACGATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGA 2692297 Query 117160 TTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATG 117219 ||| ||||| || || | |||| | | |||||| ||| || || | | |||| Sbjct 2692298 GCACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGATG 2692357 Query 117220 GCGTGGATAGTTTCGGTAGTGG---GTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCA 117276 | ||||| | | | ||| ||| ||| | || | || ||| || |||| Sbjct 2692358 TCCTGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCA 2692414 Query 117277 AACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGC 117336 || || ||| |||||||| || || || || || || || |||||| || || ||| Sbjct 2692415 AAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGC 2692474 Query 117337 ATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCC 117396 ||||| || |||||||| | ||| |||||| | || | ||| ||||||||||||| Sbjct 2692475 ATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACCC 2692534 Query 117397 TCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAAACCA 117455 || || ||||| |||| ||| || | || || ||| ||| | |||| | | ||| Sbjct 2692535 TCAACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAG-GAGTCCTTGTCCTGGATCCA 2692593 Query 117456 TTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAA 117515 | || ||||| | |||||||| || || || | ||| | ||||| | || | Sbjct 2692594 TCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGAG 2692653 Query 117516 CT-GCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGC 117574 | |||||| | | ||||| ||||| ||||||| | | || ||||| ||| Sbjct 2692654 GTATGTTCTTTGGGCAGGC-TCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGG 2692712 Query 117575 CATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGC 117633 || | | | ||| ||| | || | ||||||| | || || ||| ||||| Sbjct 2692713 AGTGGATGTTCTCCATCATGATCTGGA-AACCGTAGAAGCATCGAGCCTCGGGAATCTGG 2692771 Query 117634 ACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAA 117692 || || || | ||| | | | | ||||| || || ||||| || |||| || Sbjct 2692772 ACCTC-GCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAA 2692830 Query 117693 GAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTC 117749 ||| || ||||||| | ||| || |||| | || ||| || | |||||||| Sbjct 2692831 GAAAGCGAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTC 2692890 Query 117750 GTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788 || ||||| ||||| | ||| | || || || ||||| Sbjct 2692891 GTGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 2692929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979465168440