Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq2 109 6e-19 >seq2 Length=9166667 Score = 109 bits (120), Expect = 6e-19 Identities = 260/391 (66%), Gaps = 3/391 (1%) Strand=Plus/Minus Query 154711 GAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGG 154770 |||| || || |||| || | || || || || || || ||||| ||| | |||| Sbjct 1155813 GAAAGGTCTGCCTGATCCCTGTTTCTGCCCACGGTACCAACCCTGCCTCTGCGGCTATGG 1155754 Query 154771 CAGGGATGAAAGTTGTAGGTGTCAAGTGTGATG--ATGA-TGGTAACATAGACATCAAAG 154827 | || ||||| || || |||||||||||||| | || ||||||| | ||||| | | Sbjct 1155753 CTGGTATGAAGGTCGTCACTGTCAAGTGTGATGGCAAGACTGGTAACCTGGACATTGAGG 1155694 Query 154828 ATCTAGAGAAGAAAGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACC 154887 |||| || || ||| | | | ||| || | ||| ||| | || |||| Sbjct 1155693 ATCTCAAGGCCAAGTGTGTCAAGCACGCTGATGAGCTTGCTGCTATCATGGTCACCTACC 1155634 Query 154888 CATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACA 154947 | || || |||||| || || | | |||| ||||| ||| | | |||||||| Sbjct 1155633 CTTCCACCTTTGGTGTTTTCGAGCCCGAGATTAAGCAGATCTGTGACCTTGTTCATGAGC 1155574 Query 154948 ATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAAC 155007 | ||||||| || || | || || || || | || || ||| | || || | Sbjct 1155573 ACGGTGGTCTCGTCTACATGGACGGTGCCAACATGAACGCTCAGATTGGTCTCTGCTCTC 1155514 Query 155008 CATGTGAGTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCAC 155067 | |||| ||| || ||||| || ||||| ||| | || || || ||||||||||| | Sbjct 1155513 CTGGTGACATTGGCGCTGATGTCTGCCATCTTAACCTCCACAAGACCTTCTGTATTCCTC 1155454 Query 155068 ATGGAGGTGGAGGTCCTGGCGTAGGTCCTAT 155098 | || ||||| || ||||| || |||||||| Sbjct 1155453 ACGGTGGTGGTGGCCCTGGTGTCGGTCCTAT 1155423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579211489531040