Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3 307 2e-78 >seq3 Length=8783590 Score = 307 bits (340), Expect = 2e-78 Identities = 1145/1754 (65%), Gaps = 78/1754 (4%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | ||| |||||||||||| || || || ||||||||||| ||||| Sbjct 3509525 ACAGTGAACTGGATAGGAGCAGCAGCAGCCTGTGTACGGAGGTAGTACATGCCAGTCTTG 3509584 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| |||||| | |||||| |||| |||| | | || Sbjct 3509585 AGACCGAGCTT---CCAGCCAGCGAAGTGCATACTGGTGA---TCTTACCCATGGTAG-- 3509636 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCC 212729 |||| | || || || | ||| || || || ||| || || || | | Sbjct 3509637 -GGTCCT--TCATG-------TGAATGTTGAGAGATTGGGACTGATCAATAAAGGCACCA 3509686 Query 212730 CTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATT 212789 | ||| || ||||| | | | | || ||| || | ||||||||| |||||| | | Sbjct 3509687 CGGTCCGCAGCCATTTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGA 3509746 Query 212790 TCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGC 212849 |||||| || | |||| | |||||||||||| | ||| || || ||| |||| Sbjct 3509747 GCTTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACC---GT-TAT---CAGC 3509799 Query 212850 --TGCAGGCG------CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCA 212901 || | ||| ||| | ||| ||| || ||| || | || ||| | | Sbjct 3509800 AATG-ATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCTTCAGAA 3509858 Query 212902 GGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAG 212961 | |||||||| | |||||| || || | || || | | ||||| | ||| || | Sbjct 3509859 GCCAGGGGTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGG 3509918 Query 212962 TGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGG 213021 |||||||||||| || ||||||||| || |||||||| | |||||||| || ||||| | Sbjct 3509919 TGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAG 3509978 Query 213022 GAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC-GAAGCTCTGCC 213080 |||| || || |||||||| | | |||||| | | | | || | || | || Sbjct 3509979 GAGCAACGAGTAGACTGTTGCGGATACCGTGCGT-CTTAACATCCTCCCGGAGGGATTCC 3510037 Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATG 213140 |||||||| | |||| ||| || || ||||||||||||||||| | || Sbjct 3510038 CAGTCCCAAAGGTCAGAG-GGT--------TTGACATTCCACATGTCAAACTGGAGAATA 3510088 Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 || | | || ||||| | ||| |||||||||||| | ||||||||| |||| | Sbjct 3510089 CCCTCCGAGGCAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCCTTGGCGAGCT-G 3510147 Query 213201 CAG-GACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTT 213259 || || | || ||||||| ||||||||| || || || | | |||| |||| Sbjct 3510148 CACAGAGGTGGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACG 3510207 Query 213260 GGCCTCTGGGGACGTGAAGGGCATCATCA-TGCGTTGGAACACATCAGCCAGCCCCTGGA 213318 ||||| || ||| |||||||| | ||| |||| ||||||| || || || | Sbjct 3510208 AGCCTCAGGAGACTCAAAGGGCATGCGGAGTGCAA-GGAAGGCATCAGCGAGACCTTGAA 3510266 Query 213319 CCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAA 213377 | || | || ||||||| ||| | || ||| ||| |||| || | || ||||| Sbjct 3510267 CACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCT-TCTTGCACAGGGTAG 3510325 Query 213378 AAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGG 213437 ||| ||||| |||||||| | ||||||| | |||| ||||||| | || Sbjct 3510326 TGGTTTACATCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACATCGTGAAGC 3510385 Query 213438 TACTCGTGATTG-AACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGC 213496 | || | | | |||| | | | | | | | || |||||| | | | ||| Sbjct 3510386 TTCTTGAAGTCGTAACAAGCATCTTCA-TAATTAATGAAAGAAGGCAGAGACAAGGAGGC 3510444 Query 213497 CAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556 ||||||||||| || ||||| | || | | |||||| |||||||||||||| ||||| Sbjct 3510445 AAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCAAAGGTT 3510504 Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAG-AATCCTTGT 213615 | || ||| ||||| || ||||||| ||| ||| ||||| | |||| |||||||| Sbjct 3510505 GGAGCTTCGAATGGTACCAAGGTTCTTTTGG-TTGCTCTTGCGGTTGCAGTGATCCTTGT 3510563 Query 213616 AGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACC 213675 |||||||| | ||| ||||||||| ||||| | | || || | ||| || | | Sbjct 3510564 AGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAAGCTTCT 3510623 Query 213676 TGGCCTTGA-CCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGCTC 213733 |||||||| || || ||| | | | | | |||||||| ||||| || | Sbjct 3510624 GGGCCTTGATAGACTTGC--GACCCTTAC---CCTCTCTCTCGTACTTCTCGTACAGAGC 3510678 Query 213734 GTTGAATTCGTGGCCCCAG-ACCCTGTCCAGTCCCGGACAGGATGCGGGACACATGAGGC 213792 | || |||| || || | | | |||| || || || ||| |||||||| Sbjct 3510679 CTCAAACTCGTCACCGTAGCAGTCAG-CCAGGCCAGGGCACTCGTTGGGGCACATGAGAG 3510737 Query 213793 TCCAGTCCCCG-TCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTG 213851 |||| || ||| || |||| ||| | || ||| || || || |||| ||| || || | Sbjct 3510738 TCCATTCGCCGTTCTTCTC-GACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGG 3510796 Query 213852 AACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCA 213911 |||||||| | | | ||| ||| || || || || ||||| || || || Sbjct 3510797 AACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCG 3510856 Query 213912 AAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTTG---CCG 213968 |||| || |||||||| ||||| | |||||| || || || || || | |||| || Sbjct 3510857 AAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTACCA 3510916 Query 213969 CCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTG 214028 |||||||| || | || | ||||||| || || | ||| || | ||||| Sbjct 3510917 CCCTGGTCGACATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCGTTA 3510976 Query 214029 GACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCA--GGTTGCTCATGGAGA 214086 || ||||||||||| || || || ||||| | ||| | | | || | | | | Sbjct 3510977 GAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTCA-A 3511035 Query 214087 GCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGC 214146 | || || ||||| || ||| || |||||||| || | | | || || ||| | Sbjct 3511036 G-CCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATAC 3511094 Query 214147 CGGCCATGCTGTCATCTGTGAGGTTCAGCAA-GAAGCAGCTCGAGAGCTGGGGCCTGGAC 214205 || | |||||||| || | | ||| ||| |||||| || ||||| ||| | Sbjct 3511095 CGTCAATGCTGTCCTCCTTCA-TATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGG 3511153 Query 214206 GAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTG 214265 | |||| |||||| || |||||| ||||| | | |||||| | || | ||| || Sbjct 3511154 GTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTTG 3511213 Query 214266 TAGGTCTCCAGGAC 214279 || ||||||| ||| Sbjct 3511214 TATGTCTCCAAGAC 3511227 Score = 183 bits (202), Expect = 6e-41 Identities = 488/738 (66%), Gaps = 31/738 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| | || | ||||| || ||||| ||||| || ||| |||||||||||| Sbjct 2692121 TGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCC 2692180 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACC--CGTGTCAGGCCCATCTGTTCCAGCA 47957 |||||| ||||||||| | | || |||||| | || | || | | |||| Sbjct 2692181 ATGAAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTA--CCGAGAGCAACGAGCA 2692238 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 | |||| ||||| |||||||||| | ||||||| || ||||||||| | || | Sbjct 2692239 GACGATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGAG 2692298 Query 48018 -ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATC 48076 ||| ||| | ||||| || || ||||||| ||| || ||||| || | || Sbjct 2692299 CACAAGGG-AGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGATG 2692357 Query 48077 TGCTTAACGCGGGAC-TCTGAGGGTTTGTTGCGCAGGTGCTTG-------GCATAGAGCA 48128 | || || | |||| ||| || ||| || | | | | ||| | Sbjct 2692358 TCCT------GGATCATCTGC----TTGCTG-GCACGTCCCTTAAGGTGAGAGTGGAGGA 2692406 Query 48129 TGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGA 48188 |||||||||||| |||| | || ||||| || ||||||| ||||||||||| | Sbjct 2692407 GGCAGGCAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCA 2692466 Query 48189 GACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGA 48248 |||||||||||| || | || |||||||||||||| | || || | || ||||| Sbjct 2692467 GACCAGGCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGA 2692526 Query 48249 AGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTG 48308 |||| ||||| || || || || || || | | | || || | || |||||| Sbjct 2692527 AGATACCCTCAACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCT 2692586 Query 48309 AGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCC 48368 |||||| || |||||||| |||||||| |||||| || || || || ||||| Sbjct 2692587 GGATCCATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGT 2692646 Query 48369 GGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGT 48425 |||||| | | | | | | ||| | ||||| | |||| || | || Sbjct 2692647 TGAAGAGGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAG---GGAGT 2692703 Query 48426 ACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAA 48485 | |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| Sbjct 2692704 ATGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGG 2692763 Query 48486 ACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAG 48545 | ||| || || ||||| ||| | || ||||| ||||| || ||||| || | Sbjct 2692764 GAATCTGGACCTCGCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGG 2692823 Query 48546 CAGCAAAGAAGGCAAGGA 48563 |||| ||||| || |||| Sbjct 2692824 CAGCGAAGAAAGCGAGGA 2692841 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530692407040