Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 170 4e-37 >seq3 Length=8783590 Score = 170 bits (188), Expect = 4e-37 Identities = 383/571 (67%), Gaps = 11/571 (2%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||| ||||| ||||| ||||| Sbjct 2692965 ATCTGGCAGATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATCTT 2692906 Query 25537 GCCAAGGACATGGACGGCTGGTACGC---TCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 ||||||| | ||| |||| || ||| | ||| |||||| || || Sbjct 2692905 TCCAAGGATCTCCACGACTGGAACAACCGTCTGACTGCAGATGAGCAGTTCTTCGTCTCC 2692846 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || |||||||||||||| || |||||||| || ||| || Sbjct 2692845 CACATCCTCGCTTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTTGTTGAGCGA 2692786 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 |||| | || || ||| ||||| || ||||||||||||||||| || Sbjct 2692785 TTCAGTGGCGAGGTCCAGATTCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATG 2692726 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770 || || | ||||| ||| || || || || || || ||||| | || Sbjct 2692725 GAGAACATCCACTCCGAGACATACTCC---CTACTCATTGACACCTACATCAAGGAGCCT 2692669 Query 25771 GCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGGC 25829 ||| | ||| || || ||||| || ||| || || ||||| | |||||| Sbjct 2692668 GCCCAAAGAACATACCTCTTCAACGCCATTGA-CACTATTCCTTGCATCCGAAAGAAGGC 2692610 Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889 |||||||| |||||| | | || | | | |||| | || || || || Sbjct 2692609 TGACTGGGCCATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGC 2692550 Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949 ||||||||| || ||||| ||||| ||||||||| | ||||| | || ||||||||||| Sbjct 2692549 CTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATTTTCTGGCTCAA 2692490 Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009 | || || |||||| || ||| ||| ||||||||||||||| | |||||||| Sbjct 2692489 GAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGG 2692430 Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTAC 26040 ||| |||| || ||||||||||| ||| || Sbjct 2692429 TCTTCACACTGACTTTGCCTGCCTCCTCCAC 2692399 Score = 136 bits (150), Expect = 7e-27 Identities = 698/1095 (64%), Gaps = 35/1095 (3%) Strand=Plus/Plus Query 221417 GTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGG 221475 || || |||||||||||||||||||| ||||| |||||| || ||| | ||||| || Sbjct 3510158 GTAAGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAG-CTCACGAGCCTCAGG 3510216 Query 221476 AGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACC 221535 ||| |||||||| || || | ||| | || || || || || || || | ||| Sbjct 3510217 AGACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCAGCGAGACCTTGAACACCAAGACC 3510276 Query 221536 GATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACG 221593 ||||| | ||| | | ||||| | ||| |||||| |||| || || ||| || Sbjct 3510277 AATGGGTCGGTGACGCATGTTGCTGTTGCGA--GCTTCTTGCACAGGGTAGTGGTTTACA 3510334 Query 221594 TCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGA 221653 ||||| | ||||| | ||| | | ||||| | || ||| ||||||| Sbjct 3510335 TCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACATCGTGAAGCTTCT----- 3510389 Query 221654 TTGAACACC-AACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCT 221712 |||| | ||| || | || | | | |||| || | | | Sbjct 3510390 -TGAAGTCGTAACAAGCATCT-TCATAA------TTAATGAAAGAAGGCAGAGACAAGGA 3510441 Query 221713 GGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAG 221772 ||| ||||| || || || ||||| || | | |||| |||||||| || || || Sbjct 3510442 GGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCAAAG 3510501 Query 221773 GTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TCCT 221831 |||| || ||||| || |||| || || || |||||| ||| ||| | |||| Sbjct 3510502 GTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTG-CAGTGATCCT 3510560 Query 221832 TGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTT 221891 |||||||||| || || || ||||| ||| ||| | || || || ||| || | Sbjct 3510561 TGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAAGCT 3510620 Query 221892 CTCTGGCGCTCACCGTCCTCTTGACTGC-ACCCTCGGTCTTTTCATACCCGGTATAGAGC 221950 ||||| || || ||| |||||| ||| | | | || || ||||| Sbjct 3510621 -TCTGGGCCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCG-TACAGAGC 3510678 Query 221951 ATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGA 222010 | |||||| |||||||| || ||||||| || ||| | ||| ||||| ||| Sbjct 3510679 CT--CAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGA 3510736 Query 222011 CTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGA 222070 |||| | ||| | | ||| | || ||| || || || |||||||| || ||| | Sbjct 3510737 GTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGG 3510796 Query 222071 AAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCA 222130 || || || | | || ||| ||| |||| || || | ||||| | ||||| Sbjct 3510797 AACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCG 3510856 Query 222131 AAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCA 222190 || | || |||||||| ||||| || |||| || | || || ||||||||||| ||| Sbjct 3510857 AAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTACCA 3510916 Query 222191 CCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTT 222249 ||||| || | ||| ||| | ||||||| || || | || || | ||||| Sbjct 3510917 CCCTGGTCGA-CATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCGTT 3510975 Query 222250 GGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCC---TCAGGTTACTGGCAGA 222306 || ||||||||| || ||||| | || ||| | | ||| | | Sbjct 3510976 AGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGA---ACGTT 3511032 Query 222307 CATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGAT 222366 || ||| |||||||| || || || |||||||| || ||||||| || || ||| Sbjct 3511033 CAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGAT 3511092 Query 222367 GCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGT 222426 || || || ||||||||| | | | || || || || |||| ||||| | | Sbjct 3511093 ACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGG 3511152 Query 222427 GGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATC 222486 || || ||||| || || ||||| || || || ||| | || ||||| || | Sbjct 3511153 GGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTT 3511212 Query 222487 GTACGTCTCTACGAC 222501 ||| ||||| | ||| Sbjct 3511213 GTATGTCTCCAAGAC 3511227 Score = 91.5 bits (100), Expect = 3e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| || || ||||| || || | || || | | ||||| | ||| || ||| | || Sbjct 3509866 GTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGG 3509925 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || |||||||||||| || ||||| | ||||||||| || ||||| || || || Sbjct 3509926 CTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCAGTAGGCATAGGAGCAAC 3509985 Query 221236 CAGCAGACTGTTGCG 221250 || ||||||||||| Sbjct 3509986 GAGTAGACTGTTGCG 3510000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928842698488640