Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 105 4e-17 >seq2 Length=9166667 Score = 105 bits (116), Expect = 4e-17 Identities = 157/221 (71%), Gaps = 4/221 (2%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGA 480608 |||||| ||||| || ||||| || || ||| ||| || | || || || | || Sbjct 2678447 ACGAAGGCGGAGGACGAGATGGAGGGTTGACTCCTTTTGGATA--TTGTAGTCGGAGAGG 2678504 Query 480609 GTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATT 480668 || | || ||||| ||||| || || ||||| | || || || ||||||||||| Sbjct 2678505 GTACGACCGTCCTCAAGCTGCTTGCCGGCGAAAATCAATCGCTGCTGGTCAGGAGGAATG 2678564 Query 480669 CCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCA 480728 ||||||||||| |||||||| |||||| || |||||||||| | ||| Sbjct 2678565 CCTTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTATCAGAGGACTCCACCTCA 2678624 Query 480729 AGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || |||||||| ||||| ||||| ||||| Sbjct 2678625 AGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATTTG 2678665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268171436031788