Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq1 120 3e-22 >seq1 Length=11790407 Score = 120 bits (132), Expect = 3e-22 Identities = 177/251 (71%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 158316 TACTTTCCCGTGTGAAGACGACCAGTACATCCTTGACGCAGCTGAGGAAGCGGGTGTCGA 158375 ||| ||| | ||||| || |||||||||||| |||| |||||||||| ||| | || Sbjct 11691517 TACCTTCTCATGTGATGATGACCAGTACATCATTGATAAAGCTGAGGAACAGGGCATTGA 11691458 Query 158376 ACTCAATTACTCGTGCCGTGCAGGCGCTTGTTCGTCGTGTGCGGGAAAACTCGTCTCTGG 158435 || || ||||||||||| || ||||| || || || || || | || || || Sbjct 11691457 TCTGCCGTATTCGTGCCGTGCCGGGGCTTGCTCCTCCTGCGCTGGGCGTTTGGTGTCGGG 11691398 Query 158436 CACCGTAGACCAAAGCGACCAGTCCTTCCTGGACGATGACCAAATCGATTCTGGTTTCAT 158495 | ||| |||||| | ||||| || ||| ||||||| || || || | || || | Sbjct 11691397 AAGCGTTGACCAAGGTGACCAATCTTTCATGGACGAAGAGCAGATTGCCAAAGGGTTTGT 11691338 Query 158496 TCTGACTTGTGTTTCTTATCCTACAAGTGATTGTGTGATTGAGACTGACAAGGAAGAGGA 158555 | | ||| || | ||||| || || || |||||||| ||||| |||||||||| || Sbjct 11691337 TTTACTTTGCGTCGCATATCCCACGAGCGACTGTGTGATCGAGACCCACAAGGAAGACGA 11691278 Query 158556 ACTGTATTGAT 158566 |||||| || Sbjct 11691277 CTTGTATTAAT 11691267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547745960721960