Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq2 116 4e-21 >seq2 Length=9166667 Score = 116 bits (128), Expect = 4e-21 Identities = 263/393 (67%), Gaps = 3/393 (1%) Strand=Plus/Plus Query 138187 CAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAAT 138246 |||||||||| || ||||| || ||||| || || ||||||||||| ||||| || | | Sbjct 1155421 CAATAGGACCGACACCAGGGCCACCACCACCGTGAGGAATACAGAAGGTCTTGTGGAGGT 1155480 Query 138247 TTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTA 138306 | ||||| || ||||| || ||| ||||| || ||||| | ||| || || | Sbjct 1155481 TAAGATGGCAGACATCAGCGCCAATGTCACCAGGAGAGCAGAGACCAATCTGAGCGTTCA 1155540 Query 138307 GATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATCTGTC 138366 || ||||| || | || || ||||||| | |||||||| | | ||| ||||| Sbjct 1155541 TGTTGGCACCGTCCATGTAGACGAGACCACCGTGCTCATGAACAAGGTCACAGATCTGCT 1155600 Query 138367 TGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACATGAGAGTT 138426 | || | | || || |||||| || || || || || | ||| ||| | || | Sbjct 1155601 TAATCTCGGGCTCGAAAACACCAAAGGTGGAAGGGTAGGTGACCATGATAGCAGCAAGCT 1155660 Query 138427 CAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGCCA-TCAT-- 138483 || | | | ||| || || ||||| | ||||| | ||| ||| || | Sbjct 1155661 CATCAGCGTGCTTGACACACTTGGCCTTGAGATCCTCAATGTCCAGGTTACCAGTCTTGC 1155720 Query 138484 CATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACTAGCAGGATTAGTTC 138543 |||||||||||||| || || ||||| || ||||| | ||| ||||| || || | Sbjct 1155721 CATCACACTTGACAGTGACGACCTTCATACCAGCCATAGCCGCAGAGGCAGGGTTGGTAC 1155780 Query 138544 CATGTGCTGACTCTGGTATCAGACATACATTTC 138576 | || || || | || ||||| || || |||| Sbjct 1155781 CGTGGGCAGAAACAGGGATCAGGCAGACCTTTC 1155813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578997090016120