Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3 190 2e-43 >seq3 Length=8783590 Score = 190 bits (210), Expect = 2e-43 Identities = 558/846 (66%), Gaps = 23/846 (3%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| ||||||| || || | || ||| || || || | ||| |||| Sbjct 3511284 CCTCAGCATATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGACGATGTCGATCGTGTC 3511225 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 |||||||||||| || |||||| |||| | | ||| ||| || | || || || | Sbjct 3511224 TTGGAGACATACAACCTCATGTCCAGCAAGTTCT--TCACTCATGCTTCCCCCACACTAT 3511167 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 |||| |||||||| || || ||| ||||| ||||||||| | | | ||||||| Sbjct 3511166 TCAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGG 3511107 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || |||||||||| | || || | | ||||| || || ||| ||||| Sbjct 3511106 ACAGCATTGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCTAAGATGGCTG 3511047 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| || || | || | | |||| | ||| || || || | Sbjct 3511046 GTGGTATTGGCTTGAACGTTCACCGAATCCGTGCCACTGGCTCTTACATCGCCGGAACCA 3510987 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | ||| || | ||| || |||| ||||| || || || || ||| || || |||| Sbjct 3510986 ACGGTACTTCTAACGGTGTTGTTCCCATGCTACGTGTCTTCAATAACACTGCTCGTTATG 3510927 Query 75570 TAAATCAAGCGGGGCGTCGCAAGGG-----GTCCAT-CGCGGTCTACTTGGAACCATGGC 75623 | | || ||| || |||| | || ||| ||| ||||| | || || |||| Sbjct 3510926 TCGACCA---GGGTGGTAACAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCTTGGC 3510870 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGT 75683 | |||||| || | ||||||||||| | ||| || || ||| | ||||||| || Sbjct 3510869 ACGCCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAAGAGGTCCGCG 3510810 Query 75684 GTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 | | || || || | || ||||| || || ||||| |||||||| || ||| || Sbjct 3510809 CTCGTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGA 3510750 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803 || ||||| |||| | || || || || || || || | ||| |||| Sbjct 3510749 ACGGCGAATGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTACGGTG 3510690 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTA-GAGCCAATGCGACTGT 75861 | |||||||| || || ||| ||||| || ||| ||||||| | | | || | | | Sbjct 3510689 ACGAGTTTGAGGCTCTGTACGAGAAGTACGA-GAGAGAGGGTAAGGGTC---GCAAGTCT 3510634 Query 75862 ACCA-GCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 | || | | | || | ||||| | || || || | | ||||| ||||| |||| || Sbjct 3510633 ATCAAGGCCCAGAAGCTTTGGTACGCCATCCTTGAGGCCCAGACAGAGACCGGAAACCCT 3510574 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAAT-TTGGGAACAAT 75978 | ||||| ||||||||| || ||| ||||| ||||||||||| |||| | || | Sbjct 3510573 TTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATT 3510514 Query 75979 CAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGT 76038 | | ||||| || |||||||| || || | |||||| | |||||| ||||| Sbjct 3510513 CGA-AGCTCCAACCTTTGCACCGAGATCATTGAGTACTGCGCCCCTGATGAGGTTGCTGT 3510455 Query 76039 TTGCAA 76044 |||||| Sbjct 3510454 TTGCAA 3510449 Score = 120 bits (132), Expect = 4e-22 Identities = 527/819 (64%), Gaps = 29/819 (4%) Strand=Plus/Minus Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770 ||||| || || || | ||| | ||||| ||||| |||||||||| | || ||| | Sbjct 2692929 TGGACAGCCGAGGAGATCGATCTTTCCAAGGATCTCCACGACTGGAACAACCGTCTGACT 2692870 Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830 | | |||| || ||| | ||||||| || ||||| |||| || ||||| || Sbjct 2692869 GCAGATGAGCAGTTCTTCGTCTCCCACATCCTCGCTTTCTTCGCTGCCTCTGATGGTATC 2692810 Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889 || ||||| | | | | ||| | || || || ||||| ||| || || | Sbjct 2692809 GTCAACGAGAACCTTGTTGAGCGATTCAGTGGC-GAGGTCCAGATTCCCGAGGCTCGATG 2692751 Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948 ||||||| | || | ||| ||| | | | || ||| ||||| || | | | Sbjct 2692750 CTTCTACGGTT-TCCAGATCATGATGGAGAACATCCACTCCGAGACATACTCCCTACTCA 2692692 Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAAGAAGC-AGTTATTTGAAGCCATCCAAACT 65007 |||||| ||||| ||||| | | |||||| | | || | ||||| | ||| Sbjct 2692691 TTGACACCTACATCAAGGA-GCCTGCCCAAAGAACATACCTCTTCAACGCCATTGACACT 2692633 Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCG 65066 | || || || |||||||| | ||||| || |||| | | |||| | ||| Sbjct 2692632 ATTCCTTGCATCCGAAAGAAGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGACTC- 2692574 Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126 ||| || || | || ||| |||| ||||| || ||||||||||||||| ||| | Sbjct 2692573 CTCATTTGCTCAACGTCTTGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGC 2692514 Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186 || | |||||| ||| | |||||||| || |||||||| || || |||||| || Sbjct 2692513 CTTTGCCTCTATTTTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCTGACCTTCTCCAA 2692454 Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGAC 65246 || || || || || || |||||||| ||| || |||||| || ||| || | | Sbjct 2692453 CGAGCTCATCTCTCGTGACGAGGGTCTTCACACTGACTTTGCC-TG--CCTCCTCCACTC 2692397 Query 65247 TTTGCGTAATAGAC---CCACTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGA 65303 | | ||| ||| ||| | | | ||||| | |||| | | || || ||| Sbjct 2692396 TCACCTTAAGGGACGTGCCAGCAAGCAGATGATCCAGGACATCATCACCGATGCCGTTAC 2692337 Query 65304 GATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGA 65363 |||||| | | |||| | || || ||||| ||| ||| | || |||||||| | Sbjct 2692336 CATTGAGCAGGAGTTCCTTACTGAGGCTCTCCCTTGTGCTCTTCTGGGCATGAACTCCAA 2692277 Query 65364 GAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGT-GC 65422 ||| ||||||| |||| ||| | |||||||| ||| |||| | | Sbjct 2692276 CCTCATGAAGCAGTACATCGAGTTTGTCGCTGATCGTCTGCTC------GTTGCTCTCGG 2692223 Query 65423 CACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGA 65477 | | | | | || || | || || || ||||| ||||| ||||| || | Sbjct 2692222 TAACGAGAAGGTGTACAAGGCTACAAACCCCTTCGACTTCATGGAGAACATCTCTCTGGG 2692163 Query 65478 TGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||| ||||||||||| || |||||||| |||| ||||| Sbjct 2692162 TGGCAAGACCAACTTTTTCGAGAAGCGCGTTGCCGACTA 2692124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568250261280