Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq1 102 3e-16 >seq1 Length=11790407 Score = 102 bits (112), Expect = 3e-16 Identities = 120/162 (74%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||| || ||||||||||| |||||||| |||||||||||| ||| || Sbjct 8519097 CTCGATCAAATGGGCAATTGTCATACGAGACGGAATGGCGTGAGGGTTGATGATAATATC 8519038 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTTCAGGTACAATCAAACCAAT 309803 ||| ||| || | | |||| |||||||| || | | | | | ||| || Sbjct 8519037 TGGTGTCAAACC---TTCTCTGCTGAAGGGCATATCCTCCTGTCGATAAGTAACACCGAT 8518981 Query 309804 AGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 || ||||||||| |||| | |||||||||||||||||||| Sbjct 8518980 TGTACCCTTTTGACCGTGACGAGAAGCAAACTTGTCACCAAT 8518939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951969873249368