Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-37 >seq3 Length=8783590 Score = 174 bits (192), Expect = 2e-37 Identities = 357/515 (69%), Gaps = 28/515 (5%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| ||||| ||||| ||||| ||||||||| |||| | Sbjct 2692966 GATCTGGCAGATGTAC-AAGAAGGCAGAGGCTTCCTTCTGGACAGCCGAGGAGATCGATC 2692908 Query 1455835 TCGGCGCCGA----CACGGTCCACTGGGTGT--CG-CTGAGCGACGACGAGCGCCATTTC 1455887 | | || |||| ||||| || |||| | || |||| ||| Sbjct 2692907 TTTCCAAGGATCTCCACG----ACTGGAACAACCGTCTGACTGCAGATGAGCAGTTCTTC 2692852 Query 1455888 ATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGC 1455947 || ||| ||||||| ||| ||||| ||| ||||| ||||| ||||||||| | Sbjct 2692851 GTCTCCCACATCCTCGC-TTTCTTCGCTGCCTCTGATGGTATCGTCAACGAGAACCTTGT 2692793 Query 1455948 CGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGAT 1456007 | || || | |||||||| | || ||||| || | || ||||| |||||||| Sbjct 2692792 TGAGCGATTCAGTGGCGAGGTCCAGATTCCCGAGGCTCGATGCTTCTACGGTTTCCAGAT 2692733 Query 1456008 CGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA 1456067 | || || ||||||||||| || || ||||| || || || ||||||||| ||||||| Sbjct 2692732 CATGATGGAGAACATCCACTCCGAGACATACTCCCTACTCATTGACACCTACATCAAGGA 2692673 Query 1456068 CCCGGTCGAGAAGGAC-CACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 || | | | ||| || ||||||| |||||| ||||| | || | | | || | Sbjct 2692672 GCCTGCCCA-AAGAACATACCTCTTCAACGCCATTGACACTATTCCTTGCATCCGAAAGA 2692614 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCG 1456183 |||| |||||||| || |||||| ||||||| ||| || ||||| | || Sbjct 2692613 AGGCTGACTGGGCCATTCGATGGATCCAGGACAAGGA----CTCCTCA-TTTGCTCAACG 2692559 Query 1456184 GCTCGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATC 1456240 || || | |||||| | ||| ||||| ||||| ||| ||| || || | | | || Sbjct 2692558 TCTTGTTGCCTTTGCTGCCGTTGAGGGTATCTTCTTCAGCGGTGCCTTTGC--CTCTATT 2692501 Query 1456241 TTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 || |||||||||||||| ||||||||||| ||||| Sbjct 2692500 TTCTGGCTCAAGAAGCGTGGCCTCATGCCTGGTCT 2692466 Score = 96.9 bits (106), Expect = 5e-14 Identities = 178/254 (70%), Gaps = 8/254 (3%) Strand=Plus/Minus Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582 |||||| ||| ||||| || ||| | ||||| | | ||| | || || | | | Sbjct 2692356 ATCATCACCGATGCCGTTACCATTGAGCAGGAGTTCCTTACTGAGGCTCTCCC--TTGTG 2692299 Query 1456583 CTCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||| || ||||||||| ||| | |||||| |||||||| || ||| ||||| || || Sbjct 2692298 CTCTTCTGGGCATGAACTCCAAC-CTCATGAAGCAGTACATCGAGTTT-GTCGCTGATCG 2692241 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 ||||||| || ||||| || ||||| ||| | | | ||||| ||| | | Sbjct 2692240 TCTGCTCGTTGCTCTCGGTAACG-AGAAGGTGTACAAGGCTACAAACCCCTTCGACTTCA 2692182 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG-TGGCGAGTACG 1456759 ||||| ||||| || | ||||||||||||||||||||| |||| || ||| ||| Sbjct 2692181 TGGAGAACATCTCTCTGGGTGGCAAGACCAACTTTTTCGAGAAGCGCGTTGCCGACTACC 2692122 Query 1456760 CCAAGGCCGGCGTC 1456773 |||||||| ||| Sbjct 2692121 AAAAGGCCGGTGTC 2692108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177793742217322