Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq2 107 2e-18 seq1 98.7 1e-15 >seq3 Length=8783590 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| || ||||||||||||| Sbjct 6944319 CCACCACGGAGGCGGAGGACCAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTC 6944378 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| || || ||||| || | |||||||| || || || Sbjct 6944379 AGGGTGCGGCCATCCTCGAGCTGCTTACCAGCAAAGATAAGTCGCTGCTGGTCCGGGGGA 6944438 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | |||||||| || ||||| Sbjct 6944439 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 6944498 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || |||||||| ||||| Sbjct 6944499 TCAAGGGTGATCGTCTTCCCCGTAAGGGTCTTGACGAAAATCTGCAT 6944545 >seq2 Length=9166667 Score = 107 bits (118), Expect = 2e-18 Identities = 154/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | || ||||| || || || ||||| ||||||||||||||| | Sbjct 2677932 CCACCTCGGAGGCGAAGAACAAGGTGGAGGGTTGACTCCTTCTGAATGTTGTAGTCGGAA 2677991 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||| ||||| || | |||||||| || || || Sbjct 2677992 AGGGTTCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATGAGTCGCTGCTGGTCAGGAGGA 2678051 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || ||||| || || || || || ||||| ||| | ||||| || || ||||| Sbjct 2678052 ATACCTTCCTTATCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCCACC 2678111 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGA 134703 ||||| || ||||| || || || | || || |||| Sbjct 2678112 TCGAGGGTGATGGTCTTGCCAGTAAGGGTCTTGACGA 2678148 >seq1 Length=11790407 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| || || || ||||| || |||||||||||| Sbjct 6428052 CCACCACGGAGACGGAGAACAAGGTGCAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAG 6427993 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || ||||| ||||| || || || || Sbjct 6427992 AGGGTTCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAATCGCTGTTGGTCCGGGGGA 6427933 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| ||| | ||||| || || || || Sbjct 6427932 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 6427873 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705 ||||| || ||||| || || || | || || |||||| Sbjct 6427872 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 6427834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397256536120