Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq3 123 3e-23 >seq3 Length=8783590 Score = 123 bits (136), Expect = 3e-23 Identities = 388/593 (65%), Gaps = 6/593 (1%) Strand=Plus/Plus Query 69538 TCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACT 69597 ||| ||| ||||| || || || || ||||| | | ||| | | | | || || Sbjct 3510701 TCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCATTCGCCGTTCTTCTCGACA 3510760 Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCT 69657 || |||||||| ||||| || ||||||||||| | || || || | | | ||| Sbjct 3510761 CGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCT 3510820 Query 69658 TCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCT 69717 || || || ||| ||| ||||| || ||||| | | ||| | ||||| || || Sbjct 3510821 TCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAAGGCTCA 3510880 Query 69718 AGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTG 69777 || || || || | | || ||||| || || || ||||| || | || | |||||| Sbjct 3510881 AGGTAGATAGCGAATGCACCAGGTCGCTTGTTACCACCCTGGTCGACATAACGAGCAGTG 3510940 Query 69778 TTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATA 69837 ||||| |||| | ||||| |||| || ||| ||||| |||| || ||||| | || Sbjct 3510941 TTATTGAAGACACGTAGCATGGGAACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATG 3511000 Query 69838 TAACTTCCTCTTGCGCGAATATTACTAATAGAT-AGACCTATTCCTCCTGCCATTTTAGA 69896 ||| || | || || || | | | | | | || || || || ||||| ||||| Sbjct 3511001 TAAGAGCCAGTGGCACGGAT-TCGGTGAACGTTCAAGCCAATACCACCAGCCATCTTAGA 3511059 Query 69897 GATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTT 69956 || | |||||| || | || || || ||||| || ||||| || || |||| | Sbjct 3511060 AATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATC 3511119 Query 69957 AAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGA 70016 || ||| || || |||| ||| | || || || || || |||| ||| || || Sbjct 3511120 AACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGA 3511179 Query 70017 TGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGT-TTCAATAGCTGATTCTATAT 70075 || |||||||| | || || | || |||||||| | ||| | || || | || Sbjct 3511180 AGCATGAGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAAGACACGA-TCGACAT 3511238 Query 70076 C-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTC 70127 | ||| | || || | || |||||||| | |||||||||||| || || Sbjct 3511239 CGTCACCCCAG-ATACCAACAGCAACACGCATGATCATATGCTGAGGACGCTC 3511290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686907245868840