Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=8783590 Score = 95.1 bits (104), Expect = 1e-14 Identities = 282/432 (65%), Gaps = 5/432 (1%) Strand=Plus/Plus Query 131603 GGACATTCGCTGGGACACATTAGCGACCACACGCCGTTCTGTTCAACTCGCTTCATAAAC 131662 || || ||| |||| ||||| || | ||| ||||||||| || || ||||||||||| Sbjct 3510713 GGGCACTCGTTGGGGCACATGAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAA 3510772 Query 131663 AAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTCTCTTCTGTACCCATA 131722 | ||| || | ||| | || ||||| || | ||| |||||| |||| | Sbjct 3510773 AGATCAGGGATCCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGA 3510832 Query 131723 AtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGTTCCAAATACACTGCC 131782 | ||| | || | || || || | || || ||||| || || | || | || Sbjct 3510833 TTCTTTCGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCG 3510892 Query 131783 ATTGCGCCTTTGCGC---TTACCGCCTTGATTAACATGACGAACCATGTTGTTGTATACG 131839 | ||| || ||| ||||| || || | |||| |||| | |||| ||| | || Sbjct 3510893 AATGCACCAGGTCGCTTGTTACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACA 3510952 Query 131840 CGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTAATGTAGCTGCCATTG 131899 || | |||||| | | |||||| | | || ||||| | ||||| |||| || Sbjct 3510953 CGTAGCATGGGAACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTG 3511012 Query 131900 GCTCTGATTTTGTGAACGTTGAGTCCAATACCTCC-GCCGTATTTAGAGATTAGTGCGCA 131958 || | |||| ||||||||| | |||||||| || ||| | ||||| || | || || Sbjct 3511013 GCACGGATTCGGTGAACGTTCAAGCCAATACCACCAGCCAT-CTTAGAAATCATGGCACA 3511071 Query 131959 TTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTCCGCGGCAATGTCGACTAAAAAGCA 132018 | | || || | |||||||| || | ||||||| | || || || | ||||| Sbjct 3511072 AGTCTTGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCA 3511131 Query 132019 AGAGGACAACTG 132030 ||||||| ||| Sbjct 3511132 TGAGGACAGCTG 3511143 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || || || ||||||||||||| | |||| | || |||||||| ||||| Sbjct 6944349 GTAGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTACCA 6944408 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 || | || || ||||| || ||||| || | ||||| || || ||||||| || Sbjct 6944409 GCAAAGATAAGTCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 6944468 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | ||||| | | || || || || || || | || ||||| || || Sbjct 6944469 ACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTAAGGGTC 6944528 Query 27231 TTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 6944529 TTGACGAAAATCTGCAT 6944545 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933462621272