Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq3 197 2e-45 >seq3 Length=8783590 Score = 197 bits (218), Expect = 2e-45 Identities = 1081/1708 (63%), Gaps = 67/1708 (4%) Strand=Plus/Plus Query 117828 GCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGC 117887 |||| || |||||||||||||| || |||||||| || |||||||| || | ||| Sbjct 3509552 GCCTGTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGC 3509611 Query 117888 ATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGA 117947 || || | ||| | ||| || | |||| | ||| | | |||||| ||| Sbjct 3509612 ATACTGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGATTGGGACTGA 3509671 Query 117948 TCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCC 118004 || || ||| || || ||||| ||||| | |||| ||| || || ||| Sbjct 3509672 TCAATAAAGGCACCACGGTCCGCAGCCATTTG---CACAACCTGTCGCTGAGAAATCTCC 3509728 Query 118005 CACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAT 118064 ||||||||| |||| || || | ||| | ||||| | ||| || ||||| || Sbjct 3509729 CACACAGTCTTGTACAGAGCTTTGACATCGGCAGGGATGTTGGGGATGTTCTGGATAGAA 3509788 Query 118065 CC---ACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTG 118121 || | | || ||| || | | ||||||| | | ||||| ||||| || | Sbjct 3509789 CCGTTATCAGCAATGA---TGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACA 3509845 Query 118122 AGATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA 118181 ||||||| || || |||||||| || || || || ||| || | | Sbjct 3509846 AGATCCTTCAGAAGCCAGGGGTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGG 3509905 Query 118182 TAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 118241 ||||| |||| ||||| ||||| |||||||| ||||| || | || || | ||| | Sbjct 3509906 TAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTG 3509965 Query 118242 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCC 118301 || || ||||| || || | ||| || ||||| |||| ||| | | ||| ||| Sbjct 3509966 GCAGTAGGCATAGGAGCAACGAGTAGACTGTTGCGGATACCGTGCGTCTTAACATCCTCC 3510025 Query 118302 TTGAGAGCGTCCCAGTCGTA---GTT-GAGC-TTTGTCTCCCCCTGCCACATATCAAACT 118356 ||| | |||||||| | || ||| |||| | | |||||| ||||||| Sbjct 3510026 CGGAGGGATTCCCAGTCCCAAAGGTCAGAGGGTTTGACA-----TTCCACATGTCAAACT 3510080 Query 118357 GGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCG 118416 |||| ||||| | || || || || |||| || || || |||||||| ||| | Sbjct 3510081 GGAGAATACCCTCCGAGGCAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCCTTGG 3510140 Query 118417 CCAATT---CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCAT 118473 | | | | ||| | | || || ||||| || || || || || || | | Sbjct 3510141 CGAGCTGCACAGAGGTGGTA---AGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGT 3510197 Query 118474 TCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGA 118533 ||| | ||||| || ||||| | | ||| || || |||| |||| Sbjct 3510198 TCAGCTCACGAGCCTCAGGAGACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCAGCGA 3510257 Query 118534 GACCTTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCA 118593 ||||||| ||||| || ||||| || || || | ||| || || ||||| | || Sbjct 3510258 GACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCTTCTTGCA 3510317 Query 118594 CGGGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAAC--CTTT-GTGA 118650 | || || || |||||||| | | || | || | |||||| ||| |||| Sbjct 3510318 CAGGGTAGTGGTTTACATCGATAATCTTGTTCAAGTT---GCGGACAACGACTTGAGTGA 3510374 Query 118651 TTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCAT------TGACATACTTAG 118704 || |||||||| | | | || ||| || ||||||| ||| | | || Sbjct 3510375 CATCGTGAAGCTTCTTGAAGTCGTAACA---AGCATCTTCATAATTAATGAAAGA---AG 3510428 Query 118705 GAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAA 118764 | || | | || || || || || |||| |||||| | |||||| || | Sbjct 3510429 GCAGAGACAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGA 3510488 Query 118765 TTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGT 118824 | || ||||| | ||| || || |||||| || | ||||||||| || ||| || Sbjct 3510489 TCTCGGTGCAAAGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGT 3510548 Query 118825 TACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAG 118884 | || ||||||||| |||||| | || | || ||||| || |||| || || || | Sbjct 3510549 TGCAGTGATCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGG 3510608 Query 118885 CCTTCCAGA-CATCGGCAGCTGGC-ACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 | | ||| | | || | || | | | | ||| | || |||| ||||||||| Sbjct 3510609 CGTACCAAAGCTTCTGGGCCTTGATAGACTTGCGACCCTTACCCTCTCT--CTCGTACTT 3510666 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGG 119002 ||| || || |||||||| ||||| | || | || || || || | || Sbjct 3510667 CTCGTACAGAGCCTCAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGG 3510726 Query 119003 GCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 119062 ||| | ||||| ||||| || || ||| || |||||||| || || || |||||||| Sbjct 3510727 GCACATGAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCA 3510786 Query 119063 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 119122 || ||| ||| || || ||| ||| | ||||| | || ||||| || | || Sbjct 3510787 AAGAGCCAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATC 3510846 Query 119123 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG 119182 | || || | || ||| |||||||| || || ||||| | |||| || || | | Sbjct 3510847 AAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACC---AGG 3510903 Query 119183 ACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGG 119236 || |||| |||||| ||||| | |||||| || || ||||| ||||| || Sbjct 3510904 TCGCTTGTTACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACACGTAGCATGGG 3510963 Query 119237 AATGATACCATCGGATTGGCCATTTGTCCCC-CGAA-TACGAGACTTATTGGCTCTGACA 119294 || | ||| | || || || || || ||| || ||| | | |||| | || Sbjct 3510964 AACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCC--AGTGGCACGGATT 3511021 Query 119295 TCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGA 119354 ||| | || || |||||||| || ||| ||| || || || || | |||| Sbjct 3511022 CGGTGAACGTTCAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGG 3511081 Query 119355 CTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATT 119414 | ||||||| || || || ||| |||| | | | |||||||| |||| Sbjct 3511082 GTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGC 3511141 Query 119415 TGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCTTG- 119473 |||||| || |||||||||||||| || || || | || || ||| | | |||| Sbjct 3511142 TGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGA--AGAACTTGC 3511199 Query 119474 -GGACATCTTGTCGTAGGTCTCCAAGAC 119500 |||||| || ||| ||||||||||| Sbjct 3511200 TGGACATGAGGTTGTATGTCTCCAAGAC 3511227 Score = 147 bits (162), Expect = 3e-30 Identities = 529/813 (65%), Gaps = 17/813 (2%) Strand=Plus/Plus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 ||||| |||| ||||||||||| ||||| ||||| || ||| ||| |||||||| Sbjct 2692124 TAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTCTCCATG 2692183 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAAT-TGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | || | | | || | || | ||| ||||| Sbjct 2692184 AAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTA-CCGAGAGCAACGAGCAGACG 2692242 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 ||| | ||| |||| ||||||| ||| | ||||||||| || | || ||| Sbjct 2692243 ATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGAGCACA 2692302 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGTG 129966 ||||| || || | |||| ||| ||||||| || || || | |||| | || Sbjct 2692303 AGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGATGATGTCCTG 2692362 Query 129967 AATGGTCTCCGTGC---CAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCACGGCAAACTC 130023 || ||| | ||| || ||| || | || | || ||| || |||||| || Sbjct 2692363 GATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGG--CA-GGCAAAGTC 2692419 Query 130024 CTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAG 130083 ||| |||||||||||||| |||||||| || || |||||| |||||| |||||||| Sbjct 2692420 AGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAGGCATGAG 2692479 Query 130084 ACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCAC 130143 || |||||||| | ||||||||| | ||| | || ||||||||| ||||| || Sbjct 2692480 GCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATACCCTCAAC 2692539 Query 130144 ACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCA 130202 || || |||| ||||| | |||||| ||| | | | |||| | | ||| | Sbjct 2692540 GGCAGCAAAGGCAACAAGACGTTGAGCAAATGAG-GAGTCCTTGTCCTGGATCCATCGAA 2692598 Query 130203 TCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT 130262 | ||||| | ||||| || ||| || || | || | || || | ||||| | Sbjct 2692599 TGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGAGGTATG 2692658 Query 130263 TCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGA 130322 | ||| | || || |||||||| | || |||||| || ||||| ||| |||| Sbjct 2692659 TTCTTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGGAGTGGA 2692718 Query 130323 CCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCA 130381 | | ||| || | ||| | ||||||| | || || ||| ||||| ||||| Sbjct 2692719 TGTTCTCCATCAT-GATCTGGAAACCGTAGAAGCATCGAGCCTCGGGAATCTGGACCTC- 2692776 Query 130382 TCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGC 130440 | | ||| | | | | ||||| || || ||||| || |||| || || || Sbjct 2692777 GCCACTGAATCGCTCAACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAGAAAGC 2692836 Query 130441 CAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAG 130497 ||||| | | ||| ||| |||| | ||| || | |||||||||| || Sbjct 2692837 GAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTCGTGGAG 2692896 Query 130498 ATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| || ||||| | |||||| || ||||| Sbjct 2692897 ATCCTTGGAAAGATCGATCTCCTCGGCTGTCCA 2692929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433800790360