Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 336 2e-87 >seq3 Length=8783590 Score = 336 bits (372), Expect = 2e-87 Identities = 1122/1726 (65%), Gaps = 35/1726 (2%) Strand=Plus/Plus Query 78188 GTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATAC 78247 |||| || | ||||||||||| ||||||||||| |||||| || | |||||||| Sbjct 3509556 GTGTACGGAGGTAGTACATGCCAGTCTTGAGACCGAGCTTCCAGCCAGCGAAGTGCATAC 3509615 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 | | | ||| ||| | |||| || |||| |||||||| || |||||||| || | Sbjct 3509616 TGGTGATCTTACCCATGGTAGGGTCCTTCATGTGAATGTTGAGAGATTGGGACTGATCAA 3509675 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 | | ||||| ||||| || ||||| | | ||| || | ||||||||| | | Sbjct 3509676 TAAAGGCACCACGGTCCGCAGCCATTTGCACAACCTGTCGCTGAGAAATCTCCCACACAG 3509735 Query 78368 TCCGGTAAATGGCCTTCAGCTCTTCCTGGATGTCCAGCGCTTGTAC--GCTCCCACCGGC 78425 || ||| | || || | || | |||||| | | ||| | | | |||| Sbjct 3509736 TCTTGTACAGAGCTTTGACATCGGCAGGGATGTT--GGGGATGTTCTGGATAGAACCGT- 3509792 Query 78426 TCGCA-CAAT--TTCA-TTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGAAGATCC- 78480 | || |||| | | ||||| || | | ||| || || | ||||||| Sbjct 3509793 TATCAGCAATGATGCGGTTCTTCATAGCATCGGACCAAAGACCCATGTCGACAAGATCCT 3509852 Query 78481 -CGGA--CCAGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAG 78537 | || ||||| |||| | | ||| ||||| || ||| ||||| ||||| Sbjct 3509853 TCAGAAGCCAGG----GGTTGACAACCTGGAATTCGCCAGCAAGGACTCGGCGTTGGTAG 3509908 Query 78538 ATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCG 78597 ||||||| ||||| |||||||| ||||||||| || | ||||| | || ||| Sbjct 3509909 ATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAATCTGCGACGTGCTGGCA 3509968 Query 78598 GTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATCTCGACCTTT 78657 || ||||| || || || |||||| || || | ||| |||||||| | || || Sbjct 3509969 GTAGGCATAGGAGCAACGAGTAGACTGTTGCGGATACCGTGCGTCTTAACATCCTCCCGG 3510028 Query 78658 AGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTCCGGTTGAAGGATA 78711 ||| | |||||||| ||| | || ||||||||| || || ||| Sbjct 3510029 AGGGATTCCCAGTCCCAAAGGTCAGAGGGTTTGACATTCCACATGTCAAACTGGAGAATA 3510088 Query 78712 CCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCG 78771 ||||| || || || || |||||||| || ||| | ||||||||||||||||| | | Sbjct 3510089 CCCTCCGAGGCAGGAGAGCCCTTGAAAGTGGAGTAGGGGCCCTCCTCCTTGGCGAGCT-G 3510147 Query 78772 CAT-GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCG 78830 || || | || || |||||||| | | ||||||||| |||||| ||||| || Sbjct 3510148 CACAGAGGTGGTAAGAGCAGCGTGGTAGATGGTCTCGAAGATTTGCTTGTTCAGCTCACG 3510207 Query 78831 CGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGAC 78890 |||| | || || | | || ||| | |||| |||| || || || || || Sbjct 3510208 AGCCTCAGGAGACTCAAAGGGCATGCGGAGTGCAAGGAAGGCATCAGCGAGACCTTGAAC 3510267 Query 78891 GCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAA 78950 || | | | || |||||||| ||||||||||| || || || | | ||||| Sbjct 3510268 ACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTGCGAGCTTCTTGCACAGGGTAGTG 3510327 Query 78951 GTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTT 79010 ||| |||||| | ||||| ||| || ||||| |||| || |||| | || Sbjct 3510328 GTTTACATCGATAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACATCGTGAAGCTT 3510387 Query 79011 GGCGAAATC---AAAATGAT-TTCCT--TTGATGAAAGTCGGTAGGCACAGCGATGCCAG 79064 ||| || | || || ||| | || ||||||| || || ||| || || || Sbjct 3510388 CTTGAAGTCGTAACAAGCATCTTCATAATTAATGAAAGAAGGCAGAGACAAGGAGGCAAG 3510447 Query 79065 GTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGA 79124 |||||| || || ||| || ||| | ||| ||||| || ||||| | || || Sbjct 3510448 GTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCAAAGGTTGGA 3510507 Query 79125 CGACTTGA-TGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGC 79183 | | || |||| || | |||||| ||||||||||| ||| ||| ||||||||| Sbjct 3510508 -GCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 3510566 Query 79184 ACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGG 79243 |||| | || | |||||||| ||| || || | | ||| ||| | | | ||| Sbjct 3510567 GCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAAGCTTCTGGG 3510626 Query 79244 CCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCGGTACAACTCGTTGAAAG 79303 || || | ||| | ||||| | ||||| || ||||| | | || Sbjct 3510627 CCTTGATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAGAGCCTCAAACT 3510686 Query 79304 CCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCT 79363 | || || ||| || | |||||| |||||||||| |||||||| || ||| || Sbjct 3510687 CGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATGAGAGTCCATTCGC 3510746 Query 79364 CGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGC 79423 ||| |||||| || || ||| || || || |||||||| || ||| ||| ||||| | Sbjct 3510747 CGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCCAGGAACAGGTCAC 3510806 Query 79424 GGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGG 79483 | || | ||| || | || || ||| || || || || || || | || |||| Sbjct 3510807 GAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAACTCGAAGACATCGG 3510866 Query 79484 CGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGA 79543 ||||||| ||||| || ||||| ||||| | ||| |||||| || ||||||| || Sbjct 3510867 CGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTACCACCCTGGTCGA 3510926 Query 79544 CGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGACGCCGT 79603 | || || || ||||| ||||| || || |||||||| || | |||| | |||| Sbjct 3510927 CATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCGTTAGAAGTACCGT 3510986 Query 79604 TCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGAGCA-GTGGATTCCGATGCCC 79662 | || ||| ||| | || | || || || | | | | || | || || || Sbjct 3510987 TGGTTCCGGCGATGTAAGAGCCAGTGGCACGGAT-TCGGTGAACGTTCAAGCCAATACCA 3511045 Query 79663 CCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAG 79722 || | | ||| || || || || |||||| || |||||||| || || || | Sbjct 3511046 CCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATACCGTCAATGCTG 3511105 Query 79723 TCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTG 79782 || ||||||||| | || |||||||| |||| ||| || | ||||| |||||| Sbjct 3511106 TCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGGGTACCAGCGTTG 3511165 Query 79783 AAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGGCTCATCAGATCGTACGTCTCCTTG 79842 || || || || | || || ||||||||||| | ||| || | ||| |||||| | Sbjct 3511166 AATAGTGTGGGGGAAGCATGAGTGAAGAACTTGCTGGACATGAGGTTGTATGTCTCCAAG 3511225 Query 79843 ACGCGCGGGAGGTCGTCGCCGTGGATGCCGACCGCGACGCGCATGA 79888 || || || ||||| || ||| || || || || ||||||| Sbjct 3511226 ACACGATCGACATCGTCACCCCAGATACCAACAGCAACACGCATGA 3511271 Score = 295 bits (326), Expect = 7e-75 Identities = 906/1386 (65%), Gaps = 24/1386 (2%) Strand=Plus/Minus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACGACCTCCCGCGAGTC 19162 |||||| | | ||||||| || || || || ||| || ||||| || || ||| Sbjct 3511284 CCTCAGCATATGATCATGCGTGTTGCTGTTGGTATCTGGGGTGACGATGTCGATCGTGTC 3511225 Query 19163 CGCGAGACATACGACCTGATGAGCCAG-AAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 ||||||||| |||| ||| |||| ||||||||||| || || | || || || || Sbjct 3511224 TTGGAGACATACAACCTCATGT-CCAGCAAGTTCTTCACTCATGCTTCCCCCACACTATT 3511166 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 |||||| ||||| | || ||| |||| || ||||| || | ||||||||| || Sbjct 3511165 CAACGCTGGTACCCCTCAGCCTCAGCTGTCCTCATGCTTCCTTGTTGATATGAAGGAGGA 3511106 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 ||||||||| || |||||||| || |||||| || || || || ||| | | || Sbjct 3511105 CAGCATTGACGGTATCTACGATACCCTCAAGACTTGTGCCATGATTTCTAAGATGGCTGG 3511046 Query 19342 GGGTATCGGGATCCAC-TGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGACGA 19400 ||||| || | || | | | | ||||| | | ||| | ||| || || | Sbjct 3511045 TGGTATTGGCTTGAACGTTCACCGA-ATCCGTGCCACTGGCTCTTACATCGCCGGAACCA 3510987 Query 19401 ACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACG 19460 |||| | ||||| | || || ||||| || |||||||| ||||| || | || | Sbjct 3510986 ACGGTACTTCTAACGGTGTTGTTCCCATGCTACGTGTCTTCAATAACACTGCTCGTTATG 3510927 Query 19461 TCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACG 19520 || ||||||| || ||| || || | ||||| |||||||| ||||| ||||||| Sbjct 3510926 TCGACCAGGGTGGTAACAAGCGACCTGGTGCATTCGCTATCTACCTTGAGCCTTGGCACG 3510867 Query 19521 CGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC 19580 | || ||| | || ||||| || || || ||| || ||| | || ||| | ||| || Sbjct 3510866 CCGATGTCTTCGAGTTCCTTGATCTCCGAAAGAATCACGGTAAGGAAGAGGTCCGCGCTC 3510807 Query 19581 GCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGACG 19640 | ||||| ||| ||| | ||||| || || || || ||| || || |||||| ||| Sbjct 3510806 GTGACCTGTTCCTGGCTCTTTGGATCCCTGATCTTTTTATGAAGCGTGTCGAGAAGAACG 3510747 Query 19641 AAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGAGG 19700 |||||| || |||||||| |||| ||||||||||| | ||| |||||| || | Sbjct 3510746 GCGAATGGACTCTCATGTGCCCCAACGAGTGCCCTGGCCTGGCTGACTGCTACGGTGACG 3510687 Query 19701 CGTTCAATGAGTTGTACCGGACTTACG-TAGCCCAGGGCCGGTTCAAGAAGGTGGTCCGG 19759 ||| | | ||||| || |||| || || || || ||| || | Sbjct 3510686 AGTTTGAGGCTCTGTACGAGAAGTACGAGAGAGAGGGTAAGGGTC-GCAAGTCTATCAAG 3510628 Query 19760 GCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTACATG 19819 |||| | | | ||| || | |||| | |||| |||||||| | || | |||| Sbjct 3510627 GCCCAGAAGCTTTGGTACGCCATCCTTGAGGCCCAGACAGAGACCGGAAACCCTTTCATG 3510568 Query 19820 TGCTACAAGGA-CGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGA-TCAAGT 19877 ||||||||| | | || ||| |||| || || |||||| | || | | || | Sbjct 3510567 CTCTACAAGGATCACTGC-AACCGCAAGAGCAACCAAAAGAACCTTGGTACCATTCGAAG 3510509 Query 19878 CGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTA 19937 | |||||||| || || || ||||| ||| | | || || ||| ||| || || | Sbjct 3510508 C-TCCAACCTTTGCACCGAGATCATTGAGTACTGCGCCCCTGATGAGGTTGCTGTTTGCA 3510450 Query 19938 ATCTGGCGTCCCTGTGCCTGCCGACTTTCGTCA------AGGCCTCCTCCTTCGACTTTG 19991 | || || ||| ||| ||||| ||||| | | | | | | | |||||| Sbjct 3510449 ACCTTGCCTCCTTGTCTCTGCCTTCTTTCATTAATTATGAAGATGCTTGTTACGACTTCA 3510390 Query 19992 CCAAATTGTACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGA 20051 || | |||| || || | ||||| || || |||| | |||||| | Sbjct 3510389 AGAAGCTTCACGATGTCACTCAAGTCGTTGTCCGCAACTTGAACAAGATTATCGATGTAA 3510330 Query 20052 ACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCG 20111 || ||||| | | || ||||| || ||||| ||||| || || | | | Sbjct 3510329 ACCACTACCCTGTGCAAGAAGCTCGCAACAGCAACATGCGTCACCGACCCATTGGTCTTG 3510270 Query 20112 GCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGACGATCCCAAGG 20171 | || || || || || || | ||| | ||| || | | || || ||| ||| Sbjct 3510269 GTGTTCAAGGTCTCGCTGATGCCTTCCTTGCACTCCGCATGCCCTTTGAGTCTCCTGAGG 3510210 Query 20172 CGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATC-G 20230 | || ||||| |||||| ||||||||| || | |||||||| || || || | Sbjct 3510209 CTCGTGAGCTGAACAAGCAAATCTTCGAGACCATCTACCACGCTGCTCTTACCACCTCTG 3510150 Query 20231 TGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAG 20290 ||| | |||||||| ||||| ||||| ||| || |||||||| || || || || ||| Sbjct 3510149 TGC-AGCTCGCCAAGGAGGAGGGCCCCTACTCCACTTTCAAGGGCTCTCCTGCCTCGGAG 3510091 Query 20291 GGTATCCTCCAGCCGGACATGTGGGGCGTCA------CTGAGAATGAGTTTTGGAGCGCC 20344 ||||| |||||| ||||||||| |||| |||| | | ||| || Sbjct 3510090 GGTATTCTCCAGTTTGACATGTGGAATGTCAAACCCTCTGACCTTTGGGACTGGGAATCC 3510031 Query 20345 CTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCATGCCG 20404 ||| || || | ||||| ||||| | |||||| | ||||| || || ||||| Sbjct 3510030 CTCCGGGAGGATGTTAAGACGCACGGTATCCGCAACAGTCTACTCGTTGCTCCTATGCCT 3509971 Query 20405 ACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGACCAAC 20464 || ||| || | ||||| | || ||||||||| |||||||| ||||| ||||| Sbjct 3509970 ACTGCCAGCACGTCGCAGATTCTTGGCAACAACGAGTGCTTCGAGCCCTACACCTCCAAC 3509911 Query 20465 ATCTAC 20470 |||||| Sbjct 3509910 ATCTAC 3509905 Score = 127 bits (140), Expect = 2e-24 Identities = 246/356 (69%), Gaps = 9/356 (3%) Strand=Plus/Minus Query 59769 GATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATC 59828 || ||||||||| ||||||| || | ||||||| | ||| | | ||| ||| Sbjct 2692776 GAGGTCCAGATTCCCGAGGCTCGATGCTTCTACGGTTTCCAGATCATGATGGAGAACATC 2692717 Query 59829 CACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGA--AGAGAAGG 59886 ||||||||||| ||||| || | || || | | ||||||| || | | |||| Sbjct 2692716 CACTCCGAGACATACTCCCTACTCATTGACACCTACATCAAGGAGCCTGCCCAAAGAA-- 2692659 Query 59887 CTGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCC 59945 | || ||| ||||| || || | || ||| || | || || || |||||| Sbjct 2692658 CATACCTCTTCAACGCCATTGACACTATTCCTTGCATCCGAA-AGAAGGCTGACTGGGCC 2692600 Query 59946 ATGCAGTGGATGA--GTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGC 60002 || | ||||| | | ||| | |||||||| |||||||| | || ||||| | Sbjct 2692599 ATTCGATGGATCCAGGACAAGGACTCCTCATTTGCTCAACGTCTTGTTGCCTTTGCTGCC 2692540 Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || || || ||||||||| || | || |||||||||||||||| ||||||||| Sbjct 2692539 GTTGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCTATTTTCTGGCTCAAGAAGCGTGGC 2692480 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCA 60118 |||||||| || |||| |||||||||||||| || || || |||||||| || || Sbjct 2692479 CTCATGCCTGGTCTGACCTTCTCCAACGAGCTCATCTCTCGTGACGAGGGTCTTCA 2692424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548523558962640