Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1 107 1e-18 >seq1 Length=11790407 Score = 107 bits (118), Expect = 1e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164 ||| ||| || ||||| | ||| || ||| ||| || | || |||||||| ||||| Sbjct 2504004 GGGGAAGTTTCGCGGCTCACGCTCAAGTTGAACCTTGAGGGCGTCAACGTGATCGAGGTA 2504063 Query 27165 GACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGC 27224 || ||||| || |||| | ||| || ||| || | ||| | ||||| || Sbjct 2504064 CACATGAGCATCACCCATGACATGGGTAAGGCTTCCAGGGACCAGCTCACATACGTGCGC 2504123 Query 27225 CATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTC 27284 |||||||| || || || | ||||||||| ||||| ||||| || ||||| ||||| || Sbjct 2504124 CATCATGTGTGTTAGCAGCGCGTAGCTGGCAATGTTGAAGGGGACGCCGAGACCCATATC 2504183 Query 27285 CCCCGACCTCTGGTAGAGCTGACA 27308 | || || |||||||||||||| Sbjct 2504184 GCATGATCTTTGGTAGAGCTGACA 2504207 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506384890211