Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq3 179 5e-40 >seq3 Length=8783590 Score = 179 bits (198), Expect = 5e-40 Identities = 499/758 (66%), Gaps = 12/758 (2%) Strand=Plus/Plus Query 77685 GATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACAT 77744 || || || || ||||| || ||||||| || | | || | || |||||||| || Sbjct 3510440 GAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACTCAATGATCTCGGTGCAA 3510499 Query 77745 AGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCA-TGAGTC 77803 || || | | || || || || || | |||||||||||| ||||| ||| || Sbjct 3510500 AGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGA-TC 3510558 Query 77804 CTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGAC 77863 ||| || || || || || | ||||| || |||| | || | || | | ||| | Sbjct 3510559 CTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCAAGGATGGCGTACCAAA- 3510617 Query 77864 GACTCTAGCTTTTATCATAGATTTGTATCGCCT---CTCTCTTTCATATTGA--GTATAT 77918 | ||| | || ||||| ||| | | | |||||| || || | ||| | Sbjct 3510618 GCTTCTGGGCCTTG--ATAGACTTGCGACCCTTACCCTCTCTCTCGTACTTCTCGTACAG 3510675 Query 77919 AGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATC 77978 |||| ||||| || || || | ||| ||| |||||||| || || |||||||| Sbjct 3510676 AGCC--TCAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGCACTCGTTGGGGCACATG 3510733 Query 77979 AATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCA 78038 | | ||| || || | | || || || |||||||| |||||||| ||||| ||||| Sbjct 3510734 AGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGATCAGGGATCCAAAGAGCC 3510793 Query 78039 ATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAAC 78098 | || || || || | | ||||| || || ||||||| ||||| || ||| Sbjct 3510794 AGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCTTTCGGAGATCAAGGAAC 3510853 Query 78099 TCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTA 78158 || | | ||| | ||||| || || || || || || | | |||||||| || ||| Sbjct 3510854 TCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATGCACCAGGTCGCTTGTTA 3510913 Query 78159 CCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 78218 || ||||| || | ||| | || |||||||| | || | | ||| |||| || |||| Sbjct 3510914 CCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACACGTAGCATGGGAACAACACCG 3510973 Query 78219 TTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGAT 78278 ||||| || || || ||||| | || ||| ||| | || || || || | Sbjct 3510974 TTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGAACGTTC 3511033 Query 78279 ATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATA 78338 | || || || || ||||||||||| || | || ||| || | |||||||||||| Sbjct 3511034 AAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTCTTGAGGGTATCGTAGATA 3511093 Query 78339 CCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACA 78398 || || || ||||| ||| |||| | || ||| || || |||| ||| | ||| Sbjct 3511094 CCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAGGACAGCTGAGGCTGAGGG 3511153 Query 78399 GTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAA 78436 || || || || |||| ||| || || ||||| || || Sbjct 3511154 GTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAA 3511191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667228311840