Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq3 174 2e-38 >seq3 Length=8783590 Score = 174 bits (192), Expect = 2e-38 Identities = 682/1056 (65%), Gaps = 26/1056 (2%) Strand=Plus/Plus Query 76091 AATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 76150 || ||||| || || || ||||| |||| |||||| |||| || | | | ||| | Sbjct 3510245 AAGGCATCAGCGAGACCTTGAACACCAAGACCAATGGGTCGGTGACGCATGTTGCTGTTG 3510304 Query 76151 TCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACAACT 76210 ||||||| | | |||||| | || | ||| ||||| || || | || | |||||| Sbjct 3510305 CGAGCTTCTTGCACAGGGTAGTGGTTTACATCGATAATCTTGTTCAAGTTGCGGACAACG 3510364 Query 76211 ACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCACAAACATATTA 76270 |||| | || || | || || || || | ||||| ||| || | || | Sbjct 3510365 ACTTGAGTGACATCGTGAAGCTTCTTGAAGTCGTAACAAGCATCT-TCATAATTA-ATGA 3510422 Query 76271 A--------GAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATT 76322 | ||| | || || || || ||||| || ||||||| || | || | Sbjct 3510423 AAGAAGGCAGAGACAAGGAGGCAAGGTTGCAAACAGCAACCTCATCAGGGGCGCAGTACT 3510482 Query 76323 GTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCT 76382 || ||||| ||||| || || | || || ||||| || | ||||||||||| Sbjct 3510483 CAATGATCTCGGTGCAAAGGTTGGAGCTTCGAATGGTACCAAGGTTCTTTTGGTTGCTCT 3510542 Query 76383 TTTTGTTACA-TGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCG 76441 | ||| || ||| ||||| || || | || || |||| || || |||| | || Sbjct 3510543 TGCGGTTGCAGTGA-TCCTTGTAGAGCATGAAAGGGTTTCCGGTCTCTGTCTGGGCCTCA 3510601 Query 76442 ATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTT---CTCTCTT 76498 | || | | ||| | | ||| | || ||||| ||| | ||| |||||| Sbjct 3510602 AGGATGGCGTACCAAA-GCTTCTGGGCCTTG--ATAGACTTGCGACCCTTACCCTCTCTC 3510658 Query 76499 TCATA-TTGT-GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGAC 76556 || || || | ||| | | || ||||| || || || | ||| ||| ||||| | Sbjct 3510659 TCGTACTTCTCGTACAGAGCC--TCAAACTCGTCACCGTAGCAGTCAGCCAGGCCAGGGC 3510716 Query 76557 ATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGAT 76616 | || || || ||||| | | ||| || || | | || || || |||||||| |||| Sbjct 3510717 ACTCGTTGGGGCACATGAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATAAAAAGAT 3510776 Query 76617 CAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCT 76676 |||| ||||| ||||| | || || || || | | ||||| || || ||||| Sbjct 3510777 CAGGGATCCAAAGAGCCAGGAACAGGTCACGAGCGCGGACCTCTTCCTTACCGTGATTCT 3510836 Query 76677 TTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAA 76736 || ||||| |||||||| | | ||| | ||||| || || || || || || | Sbjct 3510837 TTCGGAGATCAAGGAACTCGAAGACATCGGCGTGCCAAGGCTCAAGGTAGATAGCGAATG 3510896 Query 76737 CACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCA 76796 |||| ||||| || ||||| ||||| || | ||| | ||||||||||| | || | | Sbjct 3510897 CACCAGGTCGCTTGTTACCACCCTGGTCGACATAACGAGCAGTGTTATTGAAGACACGTA 3510956 Query 76797 ACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCAC 76856 ||| |||| || |||||||| ||||| || ||||| | || ||| ||| |||| Sbjct 3510957 GCATGGGAACAACACCGTTAGAAGTACCGTTGGTTCCGGCGATGTAAGAGCCAGTGGCAC 3511016 Query 76857 GAATATTACTAATAGAT-AGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT 76915 | || | | | | | | ||| || || || ||||| ||||| || | ||||| Sbjct 3511017 GGAT-TCGGTGAACGTTCAAGCCAATACCACCAGCCATCTTAGAAATCATGGCACAAGTC 3511075 Query 76916 TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || | || || ||||| || || || || || ||| |||| | || ||| || || Sbjct 3511076 TTGAGGGTATCGTAGATACCGTCAATGCTGTCCTCCTTCATATCAACAAGGAAGCATGAG 3511135 Query 76976 GACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCAT 77035 |||| ||| | ||| || || || || || | ||| || || ||||||||||| | Sbjct 3511136 GACAGCTGAGGCTGAGGGGTACCAGCGTTGAATAGTGTGGGGGAAGCATGAGTGAAGAAC 3511195 Query 77036 TTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCC 77094 || || | || |||||||| || | || || | ||| || | || || Sbjct 3511196 TTGCTGGACATGAGGTTGTATGTCTCCAAGACACGATCGACATCGTCACCCCAG-ATACC 3511254 Query 77095 TACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 ||||| |||||||| | |||||||||||| || || Sbjct 3511255 AACAGCAACACGCATGATCATATGCTGAGGACGCTC 3511290 Score = 129 bits (142), Expect = 8e-25 Identities = 554/866 (64%), Gaps = 20/866 (2%) Strand=Plus/Plus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || | || || ||||||||||| || || ||||| ||| || || || Sbjct 2692118 TTTTGGTAGTCGGCAACGCGCTTCTCGAAAAAGTTGGTCTTGCCACCCAGAGAGATGTTC 2692177 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || || || || || ||| | || || | || | || | | | | Sbjct 2692178 TCCATGAAGTCGAAGGGGTTTGTAGCCTTGTACACCTTCTCGTTACCGAGAGCAACGAGC 2692237 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| || || || || || ||| ||||| | | | ||||| || | || Sbjct 2692238 AGACGATCAGCGACAAACTCGATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGAAGA 2692297 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 || |||||||| ||||| ||||| || ||||| || || ||||| | || Sbjct 2692298 GCACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATGGTAACGGCATCGGTGAT---- 2692353 Query 46579 GATGTTACTGTTTCCTCA-CTTGGTGG-ATGCATCAAATGTTTAAAC---ATTAAACATG 46633 ||||| ||| || || |||| ||| | | | | | | | | | | || | Sbjct 2692354 GATGTC-CTGGATCATCTGCTTGCTGGCACGTCCCTTAAGGTGAGAGTGGAGGAGGCAGG 2692412 Query 46634 CAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAG 46693 |||| ||| ||||| || || || | | || | ||||| || || || || |||| Sbjct 2692413 CAAAGTCAGTGTGAAGACCCTCGTCACGAGAGATGAGCTCGTTGGAGAAGGTCAGACCAG 2692472 Query 46694 GCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGC 46753 |||| || |||||||| |||||||| || |||| || || | || ||||| || | Sbjct 2692473 GCATGAGGCCACGCTTCTTGAGCCAGAAAATAGAGGCAAAGGCACCGCTGAAGAAGATAC 2692532 Query 46754 CTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCC 46810 | || || || || || || ||||| | | | | || || || | | |||| Sbjct 2692533 CCTCAACGGCAGCAAAGGCAACAAGACGTTGAGCAAATGAGGAGTCCTTGTCCTGGATCC 2692592 Query 46811 ACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGA 46870 | | ||||| |||||||| || | ||||| || || || || || || |||| Sbjct 2692593 ATCGAATGGCCCAGTCAGCCTTCTTTCGGATGCAAGGAATAGTGTCAATGGCGTTGAAGA 2692652 Query 46871 GAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTG 46930 | | || ||| || || || | || || || || | || || | || | Sbjct 2692653 GGTATGTTCTTTGGGCAGGCTCCTTGATGTAGGTGTCAATGAGTAGGGAGTATGTCTCGG 2692712 Query 46931 AATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTA 46990 | || ||||| || || ||||| || ||||| || |||| || || | |||||| | Sbjct 2692713 AGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAGCATCGAGCCTCGGGAATCTGGA 2692772 Query 46991 CCTCTGTACAAAATCGTTCAGACAAA-TTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 |||| || ||||| ||| |||| ||||| || || || |||||| ||||| || Sbjct 2692773 CCTCGCCACTGAATCGCTCA-ACAAGGTTCTCGTTGACGATACCATCAGAGGCAGCGAAG 2692831 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCA 47106 || || | | || | || | | ||||| | |||||| || |||||||| Sbjct 2692832 AAAGCGAGGATGTGGGAGACGAAGAACTGCTCATCTGCAGTCAGACGGTTGTTCCAGTCG 2692891 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 | || ||| || || | ||| | || || ||||||||||| || |||||||| || || Sbjct 2692892 TGGAGATCCTTGGAAAGATCGATCTCCTCGGCTGTCCAGAAGGAAGCCTCTGCCTTCTTG 2692951 Query 47167 TACATATTCC--ATATATCACGATAT 47190 ||||| | || || ||||| || || Sbjct 2692952 TACATCTGCCAGATCTATCAGGAAAT 2692977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932786985920