Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20poae_20[genbank_20GCA_5F001675295.1_202016-06-22] 181 sequences; 46,476,831 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 6e-13 >seq1 Length=11790407 Score = 89.7 bits (98), Expect = 6e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 167427 TTCCCGTGTGCAGATGATCAATACATCCTTGACGCGGCTGAGGAAGCGGGTGTGGACATC 167486 ||| | |||| ||||| || |||||| |||| ||||||||| ||| | || | Sbjct 11691513 TTCTCATGTGATGATGACCAGTACATCATTGATAAAGCTGAGGAACAGGGCATTGATCTG 11691454 Query 167487 AACTACTCGTGCCGTGCAGGCGCTTGTTCGTCGTGCGCGGGAAAACTCATCTCTGGCACC 167546 || ||||||||||| || ||||| || || ||||| || | | || || | | Sbjct 11691453 CCGTATTCGTGCCGTGCCGGGGCTTGCTCCTCCTGCGCTGGGCGTTTGGTGTCGGGAAGC 11691394 Query 167547 GTAGATCAAAGCGATCAATCCTTCCTGGACGATGATCAAATTGCCGAAGGTTTCCTTCTC 167606 || || ||| | || ||||| ||| ||||||| || || |||||| |||| || || | Sbjct 11691393 GTTGACCAAGGTGACCAATCTTTCATGGACGAAGAGCAGATTGCCAAAGGGTTTGTTTTA 11691334 Query 167607 ACCTGTGTGTCCTATCCAACCAGCGACTGTGT 167638 || || | ||||| || ||||||||||| Sbjct 11691333 CTTTGCGTCGCATATCCCACGAGCGACTGTGT 11691302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592197060151120