Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq221 107 2e-18
>seq221
Length=98460
Score = 107 bits (118), Expect = 2e-18
Identities = 201/295 (68%), Gaps = 3/295 (1%)
Strand=Plus/Minus
Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285
|||| | || || || || ||||| ||| ||| |||||||||| |||||||||||
Sbjct 72059 GGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCA 72000
Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345
||||| || || || |||||||| || || | || || || || || ||| || |
Sbjct 71999 TGATCTGGAAGCCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAACGCT 71940
Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405
| | || || ||||| |||||||| ||| || ||||| || || | || || |
Sbjct 71939 CAACGAGGTTCTCGTTGACGATGCCATCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGA 71880
Query 17406 TGAAATATTTTTCGTCCGGTGTAAGA---ACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462
|||| |||| ||||| | || ||| | |||||| | | ||| ||||| | ||
Sbjct 71879 TGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTTCCAGTCGTGAAGATCCTTGGAGAGAT 71820
Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
| | || || | ||||| || |||| ||||||| || ||||| | ||| ||
Sbjct 71819 CGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGTACATTTGCCAGAT 71765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542488257080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |