Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq221 107 2e-18 >seq221 Length=98460 Score = 107 bits (118), Expect = 2e-18 Identities = 201/295 (68%), Gaps = 3/295 (1%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || || || || ||||| ||| ||| |||||||||| ||||||||||| Sbjct 72059 GGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCA 72000 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTT 17345 ||||| || || || |||||||| || || | || || || || || ||| || | Sbjct 71999 TGATCTGGAAGCCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAACGCT 71940 Query 17346 CCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAA 17405 | | || || ||||| |||||||| ||| || ||||| || || | || || | Sbjct 71939 CAACGAGGTTCTCGTTGACGATGCCATCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGA 71880 Query 17406 TGAAATATTTTTCGTCCGGTGTAAGA---ACGCGCCAGTCCTTTAAATCTTTGGATATAT 17462 |||| |||| ||||| | || ||| | |||||| | | ||| ||||| | || Sbjct 71879 TGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTTCCAGTCGTGAAGATCCTTGGAGAGAT 71820 Query 17463 CCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | | || || | ||||| || |||| ||||||| || ||||| | ||| || Sbjct 71819 CGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGTACATTTGCCAGAT 71765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542488257080