Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq221 116 4e-21 >seq221 Length=98460 Score = 116 bits (128), Expect = 4e-21 Identities = 342/525 (65%), Gaps = 9/525 (2%) Strand=Plus/Minus Query 16237 GATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATAT 16296 ||| || ||||||||||| | | || ||||| || || ||||| | |||||| || Sbjct 72286 GATGAGCTCGTTGGAAAAGCTCAGACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGAT 72227 Query 16297 CGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCGATTAATCGTTC 16356 | |||||| | || ||||| ||||||||||||| |||||||| | | || | Sbjct 72226 GGAAGCAAAGGCACCACTGAAGAAGATACCCTCAACAGCAGCAAAAGCTACAAGACGCTG 72167 Query 16357 CGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTAT 16416 || | | || | || | | |||||| |||| || || || | | || Sbjct 72166 AGCAAAGGAAGAGTTCTTGTCCTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGAT 72107 Query 16417 ACAATCCATCGTTTCTATGGCCTTAAACAATTTCTCTTTTTCCTGAATA---TCGATTAT 16473 ||| || || || | ||| || || | | | | |||| | || | || Sbjct 72106 GCAAGGAATGGTGTCAACGGCGTTGAAGAGGTA---TGTGCGCTGAGCAGGGTCCTTGAT 72050 Query 16474 ATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAA 16533 || || ||||| || | ||| |||| ||||| |||||||| || ||||| || Sbjct 72049 GTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAA 71990 Query 16534 TCCATAGAAGCATCGAGCCTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTT 16593 |||||||||||||||||||| | || || || || || || || || | ||||| Sbjct 71989 GCCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAACGCTCAACGAGGTT 71930 Query 16594 CTCATTCACGATACCGTCACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTT 16653 ||| || ||||| || || ||||| || || || | ||||| ||||| |||| Sbjct 71929 CTCGTTGACGATGCCATCGGAGGCAGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTG 71870 Query 16654 TTCGTCAGATGTAAGA---ATATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTC 16710 ||||| || || ||| | | ||| || | | ||| ||||| | ||| | || || Sbjct 71869 CTCGTCTGAAGTCAGACGGTTGTTCCAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTC 71810 Query 16711 TGGCGTCCAAAAGCTAGCCACTGCCTTTTTATACATTTTCCAAAT 16755 | ||||| ||| |||| ||||||| || ||||||| ||| || Sbjct 71809 AGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGTACATTTGCCAGAT 71765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511411325120920