Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq51 132 6e-26
>seq51
Length=398837
Score = 132 bits (146), Expect = 6e-26
Identities = 385/586 (66%), Gaps = 10/586 (2%)
Strand=Plus/Plus
Query 53711 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 53769
|| || || || |||||||| ||||||| || | ||| || | || |||||||||||
Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGC-GCAGTACTCAATAATCTCAGTGCA 43137
Query 53770 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 53829
|| || | |||||| || | || | ||| || ||||| ||| || |||
Sbjct 43138 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 43197
Query 53830 CTTATAAAGAATGAATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGAC 53889
||| || || ||||| || | || || || |||||| || | ||| || | ||| |
Sbjct 43198 CTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAG 43257
Query 53890 GACACGAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACAA 53946
||||||| || ||| ||| | ||| ||||| ||||| | ||||
Sbjct 43258 TTTTTGAGCCTTGAT---AGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAG 43314
Query 53947 TCGTTCAAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCA 54005
|||||||| || || | || | ||| ||||| || || | || ||||| |
Sbjct 43315 AGCCTCAAACTCATCACCGTAG-CAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAA 43373
Query 54006 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 54065
| ||| || |||| | || || || ||||| ||||||||||| ||||||||||| |
Sbjct 43374 GAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGA 43433
Query 54066 TAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 54125
|| || || | | | ||||| || || |||||| ||||| ||||||
Sbjct 43434 GGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACT 43493
Query 54126 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTC 54185
| | | || | ||||| || || | ||| |||| | | || || || ||||| |
Sbjct 43494 CGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTAC 43553
Query 54186 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 54245
| ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| |
Sbjct 43554 CACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGT 43613
Query 54246 TGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT 54291
|||| | ||||||||| |||| ||| || ||| ||||||| ||
Sbjct 43614 TGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT 43659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593718030248880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |