Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq31 118 1e-21
>seq31
Length=380848
Score = 118 bits (130), Expect = 1e-21
Identities = 405/636 (64%), Gaps = 43/636 (7%)
Strand=Plus/Minus
Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731
||||||| ||| |||| || ||||| | |||||| || || || || |||| ||| |||
Sbjct 254129 AGCTGGACCTTGAGGGCGTCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 254070
Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791
| | | || || | || | || ||| || | ||||| |||||||| | ||||
Sbjct 254069 GTAAGGCTTCCAGGGACCAGATCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 254010
Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851
|| || ||||||||||| || ||||| ||||| || | || || ||||| | ||| |||
Sbjct 254009 CTAGCAATGTTGAAGGGAACACCCAGTCCCATATCGCAAGACCGTTGGTATAACTGACAG 253950
Query 145852 -GA------------------------GAGCTCCCCGCCC--------------GCCACG 145872
|| ||| || | ||| | |||
Sbjct 253949 TGAAGGTGCCCTTGGGGTTTCTCTTCTGAGTTCTCATCCCTGCTTCGGGGATAGGATACG 253890
Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932
||||||||| | | ||| || ||||| || |||| | ||| || ||||||
Sbjct 253889 TAGAACTGGGCAAACATGTGACAAGGCGGTAGAACCATCTTCTTAATGTCGGCAGGGTTC 253830
Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992
||||| | || || | | | | | |||||| | | || || | ||
Sbjct 253829 CAGGCAGAAAGAACCAAACGGCGGTCATAGGGGTTGGTTCGCAGCTTGTGAATAATCTCG 253770
Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCG 146052
||||| || || ||||| || |||||||||||||| || |||||| | || ||
Sbjct 253769 GCAAGCTGATCTACACCCTGACCGGTGTAATCTGTCTTGGCATCGACGTACTCAGCGCCA 253710
Query 146053 AAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGC 146112
||||||| ||| ||||| ||||| || || || ||||| ||| ||| | |||| ||
Sbjct 253709 AAGTGCCGCCATTGGAAGCCGTATACAGGGCCTAGGTCGCCGACCTCACGGTGCTGAAGA 253650
Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170
|| |||| || || || || ||||| | ||||||||||||| || ||||
Sbjct 253649 CCAAGGTTATCGAGAAACTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCA 253590
Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230
| ||| ||| ||||| ||| ||| |||||||||||| ||||| | | |||
Sbjct 253589 CTAAGA-CTC-TTGGAAGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCAATGACGG 253532
Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
| | |||||| | ||| ||||| || |||||||
Sbjct 253531 CGCGGGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 253496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590073252163240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |