Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq31 118 1e-21 >seq31 Length=380848 Score = 118 bits (130), Expect = 1e-21 Identities = 405/636 (64%), Gaps = 43/636 (7%) Strand=Plus/Minus Query 145672 AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGG 145731 ||||||| ||| |||| || ||||| | |||||| || || || || |||| ||| ||| Sbjct 254129 AGCTGGACCTTGAGGGCGTCAACGTGATCGAGGTACACATGAGCATCACCCATGACATGG 254070 Query 145732 ATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAG 145791 | | | || || | || | || ||| || | ||||| |||||||| | |||| Sbjct 254069 GTAAGGCTTCCAGGGACCAGATCACAGACGTGTGCCATCATGTGTGTCAGCAGCGCGTAG 254010 Query 145792 CTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG 145851 || || ||||||||||| || ||||| ||||| || | || || ||||| | ||| ||| Sbjct 254009 CTAGCAATGTTGAAGGGAACACCCAGTCCCATATCGCAAGACCGTTGGTATAACTGACAG 253950 Query 145852 -GA------------------------GAGCTCCCCGCCC--------------GCCACG 145872 || ||| || | ||| | ||| Sbjct 253949 TGAAGGTGCCCTTGGGGTTTCTCTTCTGAGTTCTCATCCCTGCTTCGGGGATAGGATACG 253890 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTC 145932 ||||||||| | | ||| || ||||| || |||| | ||| || |||||| Sbjct 253889 TAGAACTGGGCAAACATGTGACAAGGCGGTAGAACCATCTTCTTAATGTCGGCAGGGTTC 253830 Query 145933 CAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCC 145992 ||||| | || || | | | | | |||||| | | || || | || Sbjct 253829 CAGGCAGAAAGAACCAAACGGCGGTCATAGGGGTTGGTTCGCAGCTTGTGAATAATCTCG 253770 Query 145993 CTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCG 146052 ||||| || || ||||| || |||||||||||||| || |||||| | || || Sbjct 253769 GCAAGCTGATCTACACCCTGACCGGTGTAATCTGTCTTGGCATCGACGTACTCAGCGCCA 253710 Query 146053 AAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGC 146112 ||||||| ||| ||||| ||||| || || || ||||| ||| ||| | |||| || Sbjct 253709 AAGTGCCGCCATTGGAAGCCGTATACAGGGCCTAGGTCGCCGACCTCACGGTGCTGAAGA 253650 Query 146113 CCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCG 146170 || |||| || || || || ||||| | ||||||||||||| || |||| Sbjct 253649 CCAAGGTTATCGAGAAACTCGCGCGAGCCGTTTCCATCCCAGATCTTGATACCGGCCTCA 253590 Query 146171 CGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCC 146230 | ||| ||| ||||| ||| ||| |||||||||||| ||||| | | ||| Sbjct 253589 CTAAGA-CTC-TTGGAAGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCAATGACGG 253532 Query 146231 CCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | | |||||| | ||| ||||| || ||||||| Sbjct 253531 CGCGGGTGAAGACACGCTTCGTGGTAAGGAGGGGGA 253496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073252163240