Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq51 282 4e-71
seq174 98.7 9e-16
seq46 91.5 1e-13
>seq51
Length=398837
Score = 282 bits (312), Expect = 4e-71
Identities = 635/949 (67%), Gaps = 4/949 (0%)
Strand=Plus/Plus
Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086
|||||||| ||||| ||||| ||||| || || |||||| | ||| || || ||
Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCAC 43138
Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146
|| ||| | || || || | || | |||||||| || || ||||| ||||
Sbjct 43139 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 43198
Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206
|||||||||||| | || | || ||||| ||| | ||||| || || ||| |
Sbjct 43199 TTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGT 43258
Query 23207 GTCTGAGCGTGAACACGTCGCACGTACCT-GCCTTCTTCCTCGTACTTTTGGTACAACGC 23265
| ||||| | | | | | || ||| ||| ||| ||||||||||| ||||| ||
Sbjct 43259 TTTTGAGCCTTGATA-GACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGC 43317
Query 23266 GTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACT 23325
||||| || ||||||| ||||| || || || || | | | || ||||| ||| |
Sbjct 43318 CTCAAACTCATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGT 43377
Query 23326 CCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385
||| || || || || || |||| || ||||| || ||||| |||||| |||
Sbjct 43378 CCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAA 43437
Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445
||| || || ||||| |||||||| || ||| ||||||| | ||| | || || ||
Sbjct 43438 CAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAA 43497
Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505
||||| || ||||| ||||| ||||||| ||| || || || |||| ||| || || ||
Sbjct 43498 GACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACC 43557
Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565
||| ||||||||||| || ||||||||| |||| | ||||| || |||| |||||||||
Sbjct 43558 CTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGA 43617
Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625
| || || || | || || | || || | ||| | | || ||
Sbjct 43618 AGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCATTCAAGCC 43677
Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685
|| || || || || || ||||| || || || ||||| |||||||| || ||
Sbjct 43678 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATC 43737
Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTG-CGCTTTGGGCGTAG 23744
||||||||||| || | | || | ||| || || || | ||| ||| |||| |||
Sbjct 43738 AATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGG-GTAC 43796
Query 23745 CGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACG 23804
|||| ||| | || ||||| || || || ||| | | ||||| || ||||| |
Sbjct 43797 CGGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAGAACTTGCTTGACATGAGGTTGTATG 43856
Query 23805 TGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGT 23864
| || | | | ||||| | || || ||||||| ||||| ||||| ||||| |
Sbjct 43857 TTTCCAAGACACGCTCAATATTGTCACCCCAGATACCGACAGCGACTCGCATGATCATAT 43916
Query 23865 ATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTT 23924
|| || | |||| | | ||||| ||| | | ||||| | || ||
Sbjct 43917 GCTGCGGGCGCTCGGCAATTTTGCCGTCAATCTGTAGAAGATAGCTTCTAGACAGGGTCC 43976
Query 23925 TAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973
| || |||||||| | ||||||||||| | ||||| || ||||| ||
Sbjct 43977 TGAAACCAAAATAATTGTAGTTAAAGTCCCTATCGTAGACAATGGCGGA 44025
Score = 89.7 bits (98), Expect = 5e-13
Identities = 283/430 (66%), Gaps = 13/430 (3%)
Strand=Plus/Plus
Query 22241 TTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATATTTATCAA--TG 22298
|||| |||||| ||| ||||| || || || || || || ||||| | | ||| ||
Sbjct 42293 TTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCA-CAACCTG 42351
Query 22299 TACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAACGGTATCGATT 22358
| ||| || || ||||| || ||||||||||| | |||| || || ||
Sbjct 42352 T-CGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGATGTTGG 42410
Query 22359 CGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTATCGTTCCACA 22418
||| |||||| || || || ||||| || || || |||| ||| |
Sbjct 42411 GGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGGACCAAA 42470
Query 22419 AACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGAAACTCGCCGGACA 22478
||| ||| || | ||| |||| || |||| || ||||| |||||||| | |
Sbjct 42471 GACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGCCAGCAA 42530
Query 22479 AGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTA 22538
||| ||||||||||| |||||||| ||| | || ||||| | || ||||| || || |
Sbjct 42531 GGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGCCAAGAA 42590
Query 22539 TCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGT--G 22596
|||| | ||| ||| || ||||| || || | || || ||| | | |||| |
Sbjct 42591 TCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGATACCGTGAG 42650
Query 22597 CTTTGAAATTTTACTC-TTGAGCATCGACCAGTCCCACAGATCGGACGGCGTCACATTGT 22655
|||| || | ||| ||| || ||| ||||| ||||| || ||| | |||||
Sbjct 42651 TCTTGACATCCT-CTCGGAGAGATTC--CCACTCCCAAAGATCAGAGGGCTTGACATT-- 42705
Query 22656 CCCACATATC 22665
|||||||||
Sbjct 42706 -CCACATATC 42714
>seq174
Length=222900
Score = 98.7 bits (108), Expect = 9e-16
Identities = 143/202 (71%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 31203 TCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCG 31262
|||| ||||| || || ||||| || |||||| |||| || || ||||||||| |||
Sbjct 54212 TCGTCAAGACCCTCACTGGCAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCG 54153
Query 31263 AAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAA 31322
| | ||||| | || ||||||||| ||| | || || ||||||||||| || |
Sbjct 54152 ACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAGCAGCGCCTTA 54093
Query 31323 TATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAG 31382
| || ||||| || ||| | || ||| | || | ||| || ||||| || || |
Sbjct 54092 TCTTTGCTGGTAAGCAGCTCGAGGACGGTCGAACCCTCTCCGACTACAACATCCAGAAGG 54033
Query 31383 AATCGACTCTTCATCTGGTACT 31404
| ||||||||||| |||| ||
Sbjct 54032 AGTCGACTCTTCACTTGGTCCT 54011
Score = 98.7 bits (108), Expect = 9e-16
Identities = 159/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || |||||||| || |||||| |||| || || | |||
Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| | || ||||| ||||| || | || || || | ||| || |||
Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || ||||| || || ||||| || ||| | || | || ||||
Sbjct 54329 ATTCAGAAGGAATCCACACTCCATCTCGTGCTTCGCCTTCGTGGTGGTA 54281
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| |||| ||||| || |||||| |||| ||||| | ||
Sbjct 54738 CATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCATC 54679
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|| | |||| | || || | || ||||||||| ||| | || || |||||
Sbjct 54678 TGATACCATCGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCA 54619
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| | || ||||| ||||| ||| | || ||| || | ||||| ||
Sbjct 54618 GCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCTCTGATTACAA 54559
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || || || || ||||| || ||| | || | || ||||
Sbjct 54558 TATTCAGAAGGAGTCCACACTCCATCTCGTGCTTCGCCTTCGTGGAGGTA 54509
>seq46
Length=272426
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| |||||||| ||||| || || || || ||||||||| | || || || | ||
Sbjct 234186 CATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 234127
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | || | ||||| | || ||||||||| || | || || |||||
Sbjct 234126 CGACACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 234067
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| || || || ||||| || ||| | || || || ||||||| || ||
Sbjct 234066 GCAGCGACTTATCTTTGCTGGTAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 234007
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||| || || || || || ||||| |||| ||
Sbjct 234006 CATCCAGAAGGAGTCCACCCTTCACTTGGTCCT 233974
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763719829520
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