Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq51 122 1e-22
>seq51
Length=398837
Score = 122 bits (134), Expect = 1e-22
Identities = 386/589 (66%), Gaps = 16/589 (3%)
Strand=Plus/Plus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 63007
|| || || || || ||||| ||||||| || | ||| || | || |||||||||||
Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGC-GCAGTACTCAATAATCTCAGTGCA 43137
Query 63008 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63067
|| || | ||| || || | || | ||| || ||||| ||| || |||
Sbjct 43138 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 43197
Query 63068 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63127
||| || || ||||| || | || || || |||| | || | ||| || | ||| |
Sbjct 43198 CTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAG 43257
Query 63128 GACTCGAGCCTTTATTATAGATTTGTATCTCCTT----TCTCTTTCGTA--TAGAGTATA 63181
| ||||||| || ||| ||| | |||| ||||| ||||| | ||| |
Sbjct 43258 TTTTTGAGCCTTGAT---AGACTTGCGAC-CCTTGCCCTCTCTCTCGTACTTTTCGTACA 43313
Query 63182 CAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CTAGGACATTCATCCGGACACA 63240
| | || ||||| || || | || | ||| | ||| || || | || ||||
Sbjct 43314 GAGCC--TCAAACTCATCACCGTAG-CAGTCAGCAAGACCAGGGCACTCGTTGGGGCACA 43370
Query 63241 TCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAG 63300
| | | ||| || |||| | || || || ||||| ||||||||||| ||||||||||
Sbjct 43371 TAAGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAG 43430
Query 63301 CTATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGA 63360
| | || || || | | | ||||| || || |||||| ||||| ||||
Sbjct 43431 CGAGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGA 43490
Query 63361 ACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGT 63420
|| | | | || | ||||| || || | ||| ||||| | | || || || ||||
Sbjct 43491 ACTCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGT 43550
Query 63421 TTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATAC 63480
| || ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||
Sbjct 43551 TACCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATAC 43610
Query 63481 CGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT 63529
|||| || ||||||||||||||| ||| || ||| ||||||| ||
Sbjct 43611 CGTTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT 43659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629813813221680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |