Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq51 123 3e-23 >seq51 Length=398837 Score = 123 bits (136), Expect = 3e-23 Identities = 383/586 (65%), Gaps = 10/586 (2%) Strand=Plus/Plus Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 65800 || || || || |||||||| ||||||| || | ||| || | || ||||||||||| Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGC-GCAGTACTCAATAATCTCAGTGCA 43137 Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860 || || | |||||| || | || | ||| || ||||| ||| || ||| Sbjct 43138 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 43197 Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920 ||| || || ||||| || | || || || |||| | || | ||| || | ||| | Sbjct 43198 CTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAG 43257 Query 65921 GACTCGAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACAA 65977 | ||||||| || ||| ||| | ||| ||||| ||||| | |||| Sbjct 43258 TTTTTGAGCCTTGAT---AGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAG 43314 Query 65978 TCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCA 66036 || ||||| || || | || | ||| ||||| || || | || ||||| | Sbjct 43315 AGCCTCAAACTCATCACCGTAG-CAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAA 43373 Query 66037 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 66096 | ||| || |||| | || || || ||||| ||||||||||| ||||||||||| | Sbjct 43374 GAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGA 43433 Query 66097 TAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156 || | || | | | ||||| || || |||||| ||||| |||||| Sbjct 43434 GGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACT 43493 Query 66157 CCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 66216 | | | || ||||| || || | ||| ||||| | | || || || ||||| | Sbjct 43494 CGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTAC 43553 Query 66217 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 66276 | ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| | Sbjct 43554 CACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGT 43613 Query 66277 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT 66322 |||| ||||||||||| |||| ||| || ||| | ||||| || Sbjct 43614 TGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT 43659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658168842736040