Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq51 123 3e-23
>seq51
Length=398837
Score = 123 bits (136), Expect = 3e-23
Identities = 383/586 (65%), Gaps = 10/586 (2%)
Strand=Plus/Plus
Query 65742 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 65800
|| || || || |||||||| ||||||| || | ||| || | || |||||||||||
Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGC-GCAGTACTCAATAATCTCAGTGCA 43137
Query 65801 AAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 65860
|| || | |||||| || | || | ||| || ||||| ||| || |||
Sbjct 43138 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 43197
Query 65861 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 65920
||| || || ||||| || | || || || |||| | || | ||| || | ||| |
Sbjct 43198 CTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAG 43257
Query 65921 GACTCGAGCCTTTATTATAGATTTGTATCTCTTT---TCTCTTTCGTATAGTGTATACAA 65977
| ||||||| || ||| ||| | ||| ||||| ||||| | ||||
Sbjct 43258 TTTTTGAGCCTTGAT---AGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAG 43314
Query 65978 TCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATCA 66036
|| ||||| || || | || | ||| ||||| || || | || ||||| |
Sbjct 43315 AGCCTCAAACTCATCACCGTAG-CAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAA 43373
Query 66037 ACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 66096
| ||| || |||| | || || || ||||| ||||||||||| ||||||||||| |
Sbjct 43374 GAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGA 43433
Query 66097 TAAATAAATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 66156
|| | || | | | ||||| || || |||||| ||||| ||||||
Sbjct 43434 GGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACT 43493
Query 66157 CCATAATATCATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTC 66216
| | | || ||||| || || | ||| ||||| | | || || || ||||| |
Sbjct 43494 CGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTAC 43553
Query 66217 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 66276
| ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| |
Sbjct 43554 CACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGT 43613
Query 66277 TGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAAT 66322
|||| ||||||||||| |||| ||| || ||| | ||||| ||
Sbjct 43614 TGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT 43659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658168842736040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |