Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq51 132 6e-26 seq221 111 2e-19 >seq51 Length=398837 Score = 132 bits (146), Expect = 6e-26 Identities = 446/685 (65%), Gaps = 16/685 (2%) Strand=Plus/Plus Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763 || || || || |||||||| ||||||| || || || | ||||| |||||||| Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCAC 43138 Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823 || || | |||||| || | || | ||| || ||||| ||| || |||| Sbjct 43139 AGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCC 43198 Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883 || || || || || || | || || || |||| | || | ||| || | ||| | Sbjct 43199 TTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGT 43258 Query 71884 ACTCGAGCCTTTATTATATTCTTGTATCTCTTT---TCTCTTTCGTATTGT--GTATATA 71938 | ||||||| || | |||| | ||| ||||| ||||| | | ||| | | Sbjct 43259 TTTTGAGCCTTGAT---AGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGA 43315 Query 71939 ATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAAT-CCAGGACATTCATTCGGACACATC 71997 | || ||||| || || | ||| | || ||||| || || || || ||||| Sbjct 43316 GCC--TCAAACTCATCACCGTA-GCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATA 43372 Query 71998 AATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 72057 | | ||| || || | | | || || ||||| ||||||||||| ||||||||||| Sbjct 43373 AGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCG 43432 Query 72058 ATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 72117 | || || || | | | |||||| || || |||||| ||||| |||||| Sbjct 43433 AGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 43492 Query 72118 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTT 72177 | | | || | ||||| || || | ||| ||||| | | || || || ||||| Sbjct 43493 TCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTA 43552 Query 72178 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 72237 || ||||| || | ||| | ||| ||||| || | || | || ||| |||| ||||| Sbjct 43553 CCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCG 43612 Query 72238 TTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTG 72295 ||||| | ||||||||| |||| ||| || ||| ||||||| || || ||| Sbjct 43613 TTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGATTCGGTGGGCATTC 43672 Query 72296 ATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGA 72355 | || || || || || ||||| || || || | || || || | ||||| |||| Sbjct 43673 A-AG-CCAATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGA 43730 Query 72356 TGCCCTCTATACTATCATCCATCAT 72380 | || || || || || ||| |||| Sbjct 43731 TACCATCAATGCTGTCCTCCTTCAT 43755 Score = 96.9 bits (106), Expect = 5e-15 Identities = 344/532 (65%), Gaps = 7/532 (1%) Strand=Plus/Plus Query 70801 GTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAGA 70860 || ||||| ||||| | || || || | ||||| || ||||||||||| || || ||| Sbjct 42167 GTGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTGAGA 42226 Query 70861 CCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCTAGGATCGGCTAT 70919 ||||| |||| || || ||||| || || | ||| || | |||| || || Sbjct 42227 CCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCATTG-TAGGGTCCTTCAT 42285 Query 70920 GTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTAT 70979 |||||| || | |||||| || ||||||||||| || | ||| |||||||| | | Sbjct 42286 GTGAATGTTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCCGCAGCCATCTGCAC 42345 Query 70980 GATC-GTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | | ||| || | ||| ||||| | ||| || || | ||| ||||| | || | Sbjct 42346 AACCTGTC-GCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTGATATCGGCAGGGA 42404 Query 71039 GGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCAT 71095 ||| | | ||||| || || |||||||| ||||| || | || || || | || Sbjct 42405 TGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTCTTCATACCATCGG 42464 Query 71096 TCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCTC 71155 ||| | | ||| | | | | || || || || || ||||| || || | Sbjct 42465 ACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGGTTGACAACTTGGAACTCGC 42524 Query 71156 CAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTTC 71215 ||| | |||| || ||| || || ||| || || || | |||| || || | Sbjct 42525 CAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGTTGC 42584 Query 71216 CCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGAC 71275 | | ||| || | || ||||| |||||||| || || | ||||| || | | || Sbjct 42585 CAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAGCAGACTGTTGCGGATAC 42644 Query 71276 CATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG 71327 | || | || | ||| ||||||||||| | ||||||||| || || Sbjct 42645 CGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAGATCAGAGGG 42696 >seq221 Length=98460 Score = 111 bits (122), Expect = 2e-19 Identities = 361/556 (65%), Gaps = 10/556 (2%) Strand=Plus/Minus Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138 ||| ||||||||||| | | || | ||||||||||| | || || ||||| ||||| Sbjct 72307 GTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACCAGGCATGAGGCC 72248 Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198 ||||| || ||||| || || || ||||| | ||| |||||||| || || || || Sbjct 72247 GCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCCTCAACAGC 72188 Query 42199 CGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCACTGTCATGTATCCA-CTTTTGAG 42254 ||||| || | ||| | || || || | |||| || ||||| | || | Sbjct 72187 AGCAAAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTGGATCCATCGGATG-G 72129 Query 42255 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 42314 ||||||| ||||||||| | ||||| || || || | ||| || ||||| || | Sbjct 72128 CCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGGTATGTGC 72069 Query 42315 tttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374 | | | || || | || || || || | || || |||| || || |||| Sbjct 72068 GCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGATGT 72009 Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434 | || || ||||| || || ||||| |||| ||||||| | ||| || || | Sbjct 72008 TCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGC 71949 Query 42435 AAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 42494 || || ||| | | || ||||| || || || || ||| || || || || | | Sbjct 71948 TGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGCAGCGAAGAAAGCAAGAA 71889 Query 42495 CATGTTTTATAAAATATTTTTCGTCCGGTGTTA---ATTTATTCCAATCATTGATATCTT 42551 || || || |||| ||||| | || | || ||||| || | | ||| | Sbjct 71888 TGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTTCCAGTCGTGAAGATCCT 71829 Query 42552 TAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCC 42611 | || | ||| | || || | ||||| || || || |||||||| || ||||| | || Sbjct 71828 TGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGTACATTTGCC 71769 Query 42612 AGA--TATCATGATAT 42625 ||| ||||| || || Sbjct 71768 AGATCTATCAGGAAAT 71753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135164775560