Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq221 273 3e-68
seq51 136 6e-27
>seq221
Length=98460
Score = 273 bits (302), Expect = 3e-68
Identities = 580/847 (68%), Gaps = 29/847 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| |||||||||| ||||| |||| ||||| ||||| | || ||| |||||||
Sbjct 71765 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCTGAGGAGATCGATCTC 71824
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
|||||||| || |||| ||| | | ||| ||||| | |||| | | || || ||
Sbjct 71825 TCCAAGGATCTTCACGACTGGAACAACCGTCTGACTTCAGACGAGCAATACTTCATCTCC 71884
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGACACG 125197
|||||| | || ||||| || | ||||||||| ||||||||||| || || ||||| ||
Sbjct 71885 CACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTCGTTGA-GCG 71943
Query 125198 ATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCATGA 125256
||| ||| | || || |||| ||| ||||| || || ||||| |||||||
Sbjct 71944 TTTCAGCGGCGAGGTCCAGATCCCCGAGG-CTCGATGCTTCTATGGCTTCCAGATCATGA 72002
Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGA---TC 125313
| |||||| | ||||| |||| ||||| || ||||||| ||||| || |
Sbjct 72003 TGGAGAACATCCACTCCGAAACATACTCCCTGCTCATTGACACCTACATCAAGGACCCTG 72062
Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373
| || || | | || ||||| ||||| | ||||| | || | || || || ||||
Sbjct 72063 CTCAGCGCACATAC---CTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGG 72119
Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433
| | |||| || || |||||| | ||| | || ||||| | || | | || || |
Sbjct 72120 CGGATTGGGCCATCCGATGGATCCAGGACAAGAACTCTTCCTTTGCTCAGCGTCTTGTAG 72179
Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493
| || || || || ||||| |||||||| ||| ||||| ||||||| |||||||
Sbjct 72180 CTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCTCA 72239
Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553
|||||||||| |||||||| || |||| |||||| | || ||||| || ||||
Sbjct 72240 AGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCGTGATGAGG 72299
Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAGTGCAGAT 125613
| || ||| |||||||||| | | || ||| ||| | | | | || | |
Sbjct 72300 GTCTTCACACTGACTTTGCC-TGC--CTCCTTC---ACTCT---CACCTCAAGGGACGTG 72350
Query 125614 CCAGCGATGAAAAG-GTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAAGAGTTT 125672
||||| | | | | ||| || ||| | ||||||||||| | || || || |||||
Sbjct 72351 CCAGCAAACAGATGATTCAGGAA-ATTATCACCGATGCCGTTACCATTGAGCAGGAGTTC 72409
Query 125673 CTAACCGAATCCCTACCGGTCAGC-ATGATTGGCATGAACTGCAAGCTAATGTGCGAGTA 125731
|| || || | || || | || || | |||||||||| ||| || ||| ||||
Sbjct 72410 CTTACTGAGGCTCT-CCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTA 72468
Query 125732 CATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATTTACAA 125788
||| ||||| || || |||||||| || || | ||| || ||| | |||||
Sbjct 72469 CATCGAGTTCGTCGCTGATCGTCTCCT---CGTCGCTCTCGGCAACGAGAAGGTGTACAA 72525
Query 125789 CGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAACTTTTT 125848
|| | || ||||| || |||||| | ||| || || | || ||||||||||| ||
Sbjct 72526 GGCTACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAACTTCTT 72585
Query 125849 CGAGAAG 125855
|||||||
Sbjct 72586 CGAGAAG 72592
>seq51
Length=398837
Score = 136 bits (150), Expect = 6e-27
Identities = 315/472 (67%), Gaps = 2/472 (0%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || || || || || || || | ||| | ||| | || || |||||||| |||
Sbjct 43560 CAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTACCTTGAGCCATGGCACGCCGAC 43501
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| || || || | || | || || ||| || || |||| || || | |||
Sbjct 43500 GTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAGGAGGAGGTCCGCGCTCGTGAC 43441
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || || ||| | || ||| | ||||||||||| ||| | | ||| |
Sbjct 43440 CTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAGCGTGTCGAGAAGAACGGCGAA 43381
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| || ||||||||| || || || ||||| | || |||| || || ||||||
Sbjct 43380 TGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTGCTGACTGCTACGGTGATGAGTTT 43321
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCC-GATACGTGAGACGAGTCGATGCACG 97174
||||| |||| |||||| ||||||| | || || | | || | || |
Sbjct 43320 GAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGGGTCGCAAGTCTA-TCAAGGCTCA 43262
Query 97175 AGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTA 97234
| |||| ||| | ||||| | ||| ||| |||||| |||| || | ||| |||||
Sbjct 43261 AAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGACCGGAAACCCCTTCATGCTCTA 43202
Query 97235 CAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAA 97294
||||||| | || ||||| ||||||||| || | || |||||| |||||||
Sbjct 43201 CAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTTGGTACCATCCGAAGCTCCAA 43142
Query 97295 TCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGC 97346
|||||||| || ||| | |||||| | | || || ||| || ||||||
Sbjct 43141 CCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGATGAGGTCGCCGTTTGC 43090
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741054744381560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |