Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq174 87.8 2e-12 >seq174 Length=222900 Score = 87.8 bits (96), Expect = 2e-12 Identities = 140/199 (70%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTC 94868 || |||||||| || | ||| || ||| | || ||| | |||||| || || || | Sbjct 54313 GTGGATTCCTTCTGAATGTTGTAGTCGG--AGAGGGTTCGGCCATCCTCGAGTTGCTTGC 54370 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || | || || |||| ||||| || || ||||| || || ||||| | ||| || | || Sbjct 54371 CGGCGAAAATCAATCGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACT 54430 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 ||||| | ||| ||||| | ||||| || | |||||||| || || || || | Sbjct 54431 TGACGTTGTCGATGGTGTCGGATGACTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGG 54490 Query 94989 TTTTCACAAAGATCTGCAT 95007 | || || ||||||||||| Sbjct 54491 TCTTGACGAAGATCTGCAT 54509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288504649160