Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq128 107 3e-19 seq3 104 4e-18 >seq128 Length=186193 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| | | ||||| |||||||| || || |||||||| ||||| Sbjct 128110 GCCAAGCGTCACCGCAAGATTT-TGCGAGACAACATCCAGGGTATTACCAAGCCCGCTAT 128168 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 128169 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 128209 Score = 80.6 bits (88), Expect = 4e-11 Identities = 113/159 (71%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 16541 TATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTC 16600 || || |||| |||| |||| | |||| ||||||| || || |||| ||| || || Sbjct 128276 TACGAGGAGACCCGTGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGTGACGCCGTC 128335 Query 16601 CACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTG 16660 ||| || |||||||| || || ||||||||||| || | || |||| || || || Sbjct 128336 ACCTACACTGAGCACGCCAAGCGCAAGACTGTCACTTCTCTCGACGTCGTTTACGCCCTG 128395 Query 16661 AAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 || || || ||||| | | || ||||| || ||||| Sbjct 128396 AAGCGACAGGGCCGCACCCTCTACGGTTTCGGTGGTTAA 128434 >seq3 Length=171713 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| || | ||||| | ||||| |||||||| || ||||| ||||| ||||| Sbjct 105012 GCCAAGCGTCACCGAAAGATCT-TGCGAGACAACATCCAGGGTATCACAAAGCCCGCTAT 104954 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| | |||| Sbjct 104953 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 104913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074760218333