Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq221 136 5e-27 seq51 132 6e-26 >seq221 Length=98460 Score = 136 bits (150), Expect = 5e-27 Identities = 359/544 (66%), Gaps = 8/544 (1%) Strand=Plus/Minus Query 33318 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 33377 ||| |||||||| || | | || || ||||||||||| | || || ||||| ||||| Sbjct 72307 GTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAGACCAGGCATGAGGCC 72248 Query 33378 ACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGC 33437 ||||| || ||||| || |||||||| || | ||| |||||||| || || || || Sbjct 72247 GCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAAGATACCCTCAACAGC 72188 Query 33438 AGCAAAGGCAATAAGTCTCTCTCCA---TAACCGGCGCTGTCATGTATCCA-CTTTTGAG 33493 |||||| || | ||| | || || || | |||| || ||||| | || | Sbjct 72187 AGCAAAAGCTACAAGACGCTGAGCAAAGGAAGAGTTCTTGTCCTGGATCCATCGGATG-G 72129 Query 33494 CCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttt 33553 ||||||| ||||||||| | ||||| || || || | ||| || ||||| || | Sbjct 72128 CCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGCGTTGAAGAGGTATGTGC 72069 Query 33554 tttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGT 33613 | | | || || | || || || || | || || |||| || || |||| Sbjct 72068 GCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTATGTTTCGGAGTGGATGT 72009 Query 33614 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTAC 33673 | || || ||||| || || ||||| |||| |||||||| ||||| || || | Sbjct 72008 TCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGGGATCTGGACCTCGCCGC 71949 Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733 || || || | | || || || || || || || ||| || || || || | | Sbjct 71948 TGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGCAGCGAAGAAAGCAAGAA 71889 Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTA---GTTTATTCCAATCATTGATATCTT 33790 || || || |||| ||||||| || | | || ||||| || | | ||| | Sbjct 71888 TGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTTCCAGTCGTGAAGATCCT 71829 Query 33791 TAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCC 33850 | || | ||| | || || ||||||| || || ||||||||||| || ||||| | || Sbjct 71828 TGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGCCTTCTTGTACATTTGCC 71769 Query 33851 AGAT 33854 |||| Sbjct 71768 AGAT 71765 >seq51 Length=398837 Score = 132 bits (146), Expect = 6e-26 Identities = 386/587 (66%), Gaps = 12/587 (2%) Strand=Plus/Plus Query 62898 GATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA-TATTGTATTATCTCAGTGCA 62956 || || || || |||||||| ||||||| || | ||| || | || ||||||||||| Sbjct 43079 GAGGCAAGGTTGCAAACGGCGACCTCATCAGGGGC-GCAGTACTCAATAATCTCAGTGCA 43137 Query 62957 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63016 || || | ||| || || | || | ||| || ||||| ||| || ||| Sbjct 43138 CAGGTTGGAGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATC 43197 Query 63017 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63076 ||| || || ||||| || | || || || |||| | || | ||| || | ||| | Sbjct 43198 CTTGTAGAGCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAG 43257 Query 63077 GACTCGAGCCTTTATTATAGATTTGTATCTCCTT----TCTCTTTCGTATAGTGTATACA 63132 | ||||||| || ||| ||| | |||| ||||| ||||| | |||| Sbjct 43258 TTTTTGAGCCTTGAT---AGACTTGCGAC-CCTTGCCCTCTCTCTCGTACTTTTCGTACA 43313 Query 63133 ATCGTTCGAACTCGTCTCCCCAAACATTGTCCAAT-CCAGGACATTCATCCGGACACATC 63191 || ||||| || || | || | ||| ||||| || || | || ||||| Sbjct 43314 GAGCCTCAAACTCATCACCGTAG-CAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATA 43372 Query 63192 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCT 63251 | | ||| || |||| | || || || ||||| ||||||||||| ||||||||||| Sbjct 43373 AGAGTCCATTCGCCGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCG 43432 Query 63252 ATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAAC 63311 | || || || | | | ||||| || || |||||| ||||| |||||| Sbjct 43433 AGGAACAGGTCACGAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAAC 43492 Query 63312 GCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTT 63371 | | | || | ||||| || || | ||| ||||| | | || || || ||||| Sbjct 43493 TCGAAGACGTCGGCGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTA 43552 Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431 || ||||| || | ||| | ||| ||||| || | || | || ||| |||| |||||| Sbjct 43553 CCACCCTGGTCGACGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCG 43612 Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAAT 63478 || || ||||||||||||||| ||| || ||| ||||||| || Sbjct 43613 TTGGAAGTACCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGAT 43659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943454529960