Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq174 104 2e-17
seq221 84.2 2e-11
>seq174
Length=222900
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || | || || || | |||||| |||| | || ||| |
Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| ||||| || || || || || || ||
Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| || |||||| |||||||| |||| ||| | || |||||| |||
Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980
||||| || ||||| || ||||||| || ||
Sbjct 54329 ATTCAGAAGGAATCCACACTCCATCTCGTGCT 54298
>seq221
Length=98460
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/218 (69%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701
|| ||| || | ||||| || || || || || |||||||| ||||||| ||||| |
Sbjct 72610 CTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTC 72551
Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761
||| || ||||| || || | || ||| | ||| |||| ||| | ||| | ||
Sbjct 72550 CATGAAGTCGAAGGGGTTGGTAGCCTTGTACACCTTCTCGTTGCCGAGAGCGACGAGGAG 72491
Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820
||||| || || ||||||||||| | |||| | ||| || |||||||| | || ||
Sbjct 72490 ACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTG-GAGTTCATGCCGAGCAGAG 72432
Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATG 119858
| || | ||| | |||| ||| |||| ||||||
Sbjct 72431 CACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATG 72394
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659522042320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |