Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq174 104 2e-17 seq221 84.2 2e-11 >seq174 Length=222900 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || || || | |||||| |||| | || ||| | Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | ||||| |||||| ||||| || || || || || || || Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || |||||| |||||||| |||| ||| | || |||||| ||| Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCT 26980 ||||| || ||||| || ||||||| || || Sbjct 54329 ATTCAGAAGGAATCCACACTCCATCTCGTGCT 54298 >seq221 Length=98460 Score = 84.2 bits (92), Expect = 2e-11 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| || | ||||| || || || || || |||||||| ||||||| ||||| | Sbjct 72610 CTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCGCCAAGAGAGATGTTCTC 72551 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAACAG 119761 ||| || ||||| || || | || ||| | ||| |||| ||| | ||| | || Sbjct 72550 CATGAAGTCGAAGGGGTTGGTAGCCTTGTACACCTTCTCGTTGCCGAGAGCGACGAGGAG 72491 Query 119762 TCGATCTGCCACAAACTCGATGTATTCGCACATG-GATTGCGAATTCATGCCCAACATAG 119820 ||||| || || ||||||||||| | |||| | ||| || |||||||| | || || Sbjct 72490 ACGATCAGCGACGAACTCGATGTACTGCTTCATGAGGTTG-GAGTTCATGCCGAGCAGAG 72432 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAATG 119858 | || | ||| | |||| ||| |||| |||||| Sbjct 72431 CACAAGGGAGAGCCTCAGTAAGGAACTCCTGCTCAATG 72394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659522042320