Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq51 369 1e-96 seq221 91.5 4e-13 >seq51 Length=398837 Score = 369 bits (408), Expect = 1e-96 Identities = 1141/1741 (66%), Gaps = 46/1741 (3%) Strand=Plus/Minus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| || ||||||||||||||| | ||||| || ||| | |||||| | || Sbjct 43935 ATTGCCGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAAT 43876 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559 |||| | | |||||||| || || | | | || || | ||||| || || | Sbjct 43875 ATTGAGCGTGTCTTGGAAACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCGA 43818 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 || || | | ||| || || || | | || || | || || ||||| ||| | Sbjct 43817 GCCCCACTTTATTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTG 43758 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 | |||||||| || ||| || ||||||| || || || |||| |||||| | |||| Sbjct 43757 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTT 43698 Query 363680 CCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736 |||||| || || || ||||| || || |||| | ||||| || | | || Sbjct 43697 CCAAGATGGCTGGTGGTATTGGCTTGAATGC--CCACCGAATCCGTGCCACTGG-CTCTT 43641 Query 363737 ACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||| ||| || || |||| | || || | ||||||||||| |||||||| || Sbjct 43640 ACATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAAC 43582 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || ||||| | ||||||||||||||||| ||||| || || || || || || Sbjct 43581 AACACTGCTCGTTACGTCGACCAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTAC 43522 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 || ||||| || ||||| | || ||||| ||||| ||||| || ||| || || Sbjct 43521 CTTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAG 43462 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975 ||||| | || || ||||| |||||| || |||||| | |||| | || |||||| Sbjct 43461 GAGGAGGTCCGCGCTCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAG 43402 Query 363976 CGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 || || ||| | | | | | ||| | || | ||||| |||| || || |||||| Sbjct 43401 CGTGTCGAG--AAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTG 43344 Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093 | || | ||||| || | || ||||| ||||||||||| || ||||| |||| Sbjct 43343 CTGACTGCTACGGTGATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGG 43284 Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153 ||| ||| | || || || || || |||| ||||| | || | |||| |||| Sbjct 43283 GTCGCAAGTCTATCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGA 43224 Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213 | |||| |||| ||| | ||||| ||| |||||||||||| |||||| || ||| Sbjct 43223 CCGGAAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACC 43164 Query 364214 TTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272 ||||||| || | | || | ||||| || || ||||||||||| ||| ||| || || Sbjct 43163 TTGGTACCATCC-GAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGAT 43105 Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326 ||| ||||| || |||||||| || | | || || | || | | ||||| Sbjct 43104 GAGGTCGCCGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGAT 43045 Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384 | | | ||| | || | || | || || || | || | | | |||| | Sbjct 43044 GCTTGCTACGACTTCAAGAAGCTACACGAAGTCACTCAAGTCGTTGTCC--GCAACTTGA 42987 Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439 ||||| |||||||| || | || || ||| || || || ||| || || Sbjct 42986 ACAAGATTATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGC-----AACAT 42932 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499 |||||| || || |||||||| ||||| || || || ||||| | || | ||| Sbjct 42931 GCGTCACCGACCCATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCG 42872 Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559 ||| | ||||| || || || ||||||| || || ||| | ||||| || || || || Sbjct 42871 CATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTA 42812 Query 364560 TTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTT 364618 | || || | ||| | || |||| | | || || |||| ||||| || | Sbjct 42811 TCACGCTGCCCTTACTACCTC-TGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCT 42753 Query 364619 ATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678 |||| || ||| || |||| | ||||||||||| | |||||||||| ||| | Sbjct 42752 TCAAGGGCTCTCCTGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCT 42693 Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC- 364737 ||| | ||| | ||||| | || || | || |||| || |||| |||||| Sbjct 42692 CTGATCTTTGGGAGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACA 42633 Query 364738 -TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795 || |||||| || || |||||||| ||| ||| | ||||| || || ||||||| Sbjct 42632 GTCTGCTCGTT---GCTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACG 42576 Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855 |||||||||| || | || ||| | || |||||| || ||| | || || || | Sbjct 42575 AGTGCTTCGAGCCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCC 42516 Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915 || || || | || ||||||||||| |||| || || ||| || | | Sbjct 42515 AAGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGGTA 42456 Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975 |||||||| |||||| || | | ||||||| | |||||||| || | || | | Sbjct 42455 TGAAGAACCGTATCATTGCTGATGGTGGTTCTATCCAGAACATCCCCAACATCCCTGCCG 42396 Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGG 365035 || | ||| || | ||||| || || ||||| ||||| |||| | | | |||| Sbjct 42395 ATATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGG 42336 Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGC 365095 | || || || ||||| || ||| ||| ||||| | ||| | ||||| | | Sbjct 42335 CTGCGGACCGTGGTGCCTTCATCGACCAGTCTCAGTCTCTCAACATTCACATGAAGGACC 42276 Query 365096 CAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAG 365155 | || | |||| | || |||||| ||| || ||||| |||||| ||||| | Sbjct 42275 CTACAATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACCG 42216 Query 365156 G 365156 | Sbjct 42215 G 42215 >seq221 Length=98460 Score = 91.5 bits (100), Expect = 4e-13 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Plus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACG-TTCATTCGCGGAACG 22493 || ||||| |||||||| | |||||| | |||| |||| ||| || || | || Sbjct 72113 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAA-GAACTCTTCCTTTGCTCAGCG 72171 Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553 |||| | || ||||||| ||||| || || ||||| ||| || ||| | | ||||| Sbjct 72172 TCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTT 72231 Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613 ||||| || || || | | ||||| ||||| | ||||| || ||| | || || Sbjct 72232 CTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCG 72291 Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||||||||||| || || ||||| || Sbjct 72292 TGATGAGGGTCTTCACACTGACTTTGCCTG 72321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345567676142