Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq51 369 1e-96
seq221 91.5 4e-13
>seq51
Length=398837
Score = 369 bits (408), Expect = 1e-96
Identities = 1141/1741 (66%), Gaps = 46/1741 (3%)
Strand=Plus/Minus
Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501
|||| || ||||||||||||||| | ||||| || ||| | |||||| | ||
Sbjct 43935 ATTGCCGAGCGCCCGCAGCATATGATCATGCGAGTCGCTGTCGGTATCTGGGGTGACAAT 43876
Query 363502 GTTGATGCCGCGATTGAAACATATAAGCT--TCTAAGTGCTCGTGTATTCACGCACGCCA 363559
|||| | | |||||||| || || | | | || || | ||||| || || |
Sbjct 43875 ATTGAGCGTGTCTTGGAAACATACAACCTCATGTCAA-GCAAGT-TCTTCACTCATGCGA 43818
Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619
|| || | | ||| || || || | | || || | || || ||||| ||| |
Sbjct 43817 GCCCCACTTTATTCAACGCCGGTACCCCACAGCCTCAACTATCATCATGCTTCCTTGTTG 43758
Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679
| |||||||| || ||| || ||||||| || || || |||| |||||| | ||||
Sbjct 43757 ATATGAAGGAGGACAGCATTGATGGTATCTACGATACTCTCAAGACTTGTGCCATGATTT 43698
Query 363680 CCAAGAATGCAGGCGGAATTGG--TGTATCGATCCACAATGTTCGTGC-ACAGAACAGTT 363736
|||||| || || || ||||| || || |||| | ||||| || | | ||
Sbjct 43697 CCAAGATGGCTGGTGGTATTGGCTTGAATGC--CCACCGAATCCGTGCCACTGG-CTCTT 43641
Query 363737 ACATTCGCGGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795
|||| ||| || || |||| | || || | ||||||||||| |||||||| ||
Sbjct 43640 ACATCGCCGGTACCAATGG-TACTTCCAACGGTATCGTTCCCATGCTGCGTGTGTTCAAC 43582
Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855
|| ||||| | ||||||||||||||||| ||||| || || || || || ||
Sbjct 43581 AACACTGCTCGTTACGTCGACCAGGGTGGTAACAAGCGACCCGGTGCCTTCGCCATTTAC 43522
Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915
|| ||||| || ||||| | || ||||| ||||| ||||| || ||| || ||
Sbjct 43521 CTTGAGCCATGGCACGCCGACGTCTTCGAGTTCCTTGATCTCCGAAAGAACCACGGTAAG 43462
Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAG 363975
||||| | || || ||||| |||||| || |||||| | |||| | || ||||||
Sbjct 43461 GAGGAGGTCCGCGCTCGTGACCTGTTCCTCGCTCTTTGGATCCCTGATCTCTTCATGAAG 43402
Query 363976 CGCGTGGAGGCAGGTAAGA--ATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033
|| || ||| | | | | | ||| | || | ||||| |||| || || ||||||
Sbjct 43401 CGTGTCGAG--AAGAACGGCGAATGGACTCTTATGTGCCCCAACGAGTGCCCTGGTCTTG 43344
Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGG 364093
| || | ||||| || | || ||||| ||||||||||| || ||||| ||||
Sbjct 43343 CTGACTGCTACGGTGATGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGAGAGGGCAAGG 43284
Query 364094 CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGA 364153
||| ||| | || || || || || |||| ||||| | || | |||| ||||
Sbjct 43283 GTCGCAAGTCTATCAAGGCTCAAAAACTTTGGTACGCCATTCTCGAGGCCCAGACAGAGA 43224
Query 364154 CAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACC 364213
| |||| |||| ||| | ||||| ||| |||||||||||| |||||| || |||
Sbjct 43223 CCGGAAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACC 43164
Query 364214 TTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGAC 364272
||||||| || | | || | ||||| || || ||||||||||| ||| ||| || ||
Sbjct 43163 TTGGTACCATCC-GAAGCTCCAACCTGTGCACTGAGATTATTGAGTACTGCGCCCCTGAT 43105
Query 364273 GAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA------AAGAT 364326
||| ||||| || |||||||| || | | || || | || | | |||||
Sbjct 43104 GAGGTCGCCGTTTGCAACCTTGCCTCCTTGTCTCTGCCTTCTTTCATCAACTATGAAGAT 43045
Query 364327 GGTACTTTTGACCACCAGCATCTTTATGACGTAACCTA--TCATGCTACTTGCAATCTCG 364384
| | | ||| | || | || | || || || | || | | | |||| |
Sbjct 43044 GCTTGCTACGACTTCAAGAAGCTACACGAAGTCACTCAAGTCGTTGTCC--GCAACTTGA 42987
Query 364385 ACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATAT 364439
||||| |||||||| || | || || ||| || || || ||| || ||
Sbjct 42986 ACAAGATTATCGACGTCAACCACTACCCTGTTCAAGAGGCTCGCAACAGC-----AACAT 42932
Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA 364499
|||||| || || |||||||| ||||| || || || ||||| | || | |||
Sbjct 42931 GCGTCACCGACCCATTGGTCTCGGTGTCCAAGGTCTTGCTGATGCCTTCCTTGCTCTCCG 42872
Query 364500 GATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTA 364559
||| | ||||| || || || ||||||| || || ||| | ||||| || || || ||
Sbjct 42871 CATGCCCTTTGAGTCTCCCGAGGCTCGTGAGCTGAACAAGCAAATCTTCGAGACTATTTA 42812
Query 364560 TTTTGCCGCAATGACTGCTTCGTGTG-ATTTGGCAAAAACCAAGGGAAAGTACTCTACTT 364618
| || || | ||| | || |||| | | || || |||| ||||| || |
Sbjct 42811 TCACGCTGCCCTTACTACCTC-TGTGCAGCTCGCCAAGGAGGAGGGTCCCTACTCCACCT 42753
Query 364619 ATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCAT 364678
|||| || ||| || |||| | ||||||||||| | |||||||||| ||| |
Sbjct 42752 TCAAGGGCTCTCCTGCCTCTGAGGGCATTCTCCAGTTTGATATGTGGAATGTCAAGCCCT 42693
Query 364679 CTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAAC- 364737
||| | ||| | ||||| | || || | || |||| || |||| ||||||
Sbjct 42692 CTGATCTTTGGGAGTGGGAATCTCTCCGAGAGGATGTCAAGACTCACGGTATCCGCAACA 42633
Query 364738 -TC-CCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACG 364795
|| |||||| || || |||||||| ||| ||| | ||||| || || |||||||
Sbjct 42632 GTCTGCTCGTT---GCTCCTATGCCCACTGCTAGTACCTCGCAGATTCTTGGCAACAACG 42576
Query 364796 AGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTC 364855
|||||||||| || | || ||| | || |||||| || ||| | || || || |
Sbjct 42575 AGTGCTTCGAGCCCTACACCTCCAACATCTACCAACGCCGAGTCCTTGCTGGCGAGTTCC 42516
Query 364856 CGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCA 364915
|| || || | || ||||||||||| |||| || || ||| || | |
Sbjct 42515 AAGTTGTCAACCCCTGGCTTCTCAAGGATCTTGTCGACATGGGTCTTTGGTCCGATGGTA 42456
Query 364916 TGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAG 364975
|||||||| |||||| || | | ||||||| | |||||||| || | || | |
Sbjct 42455 TGAAGAACCGTATCATTGCTGATGGTGGTTCTATCCAGAACATCCCCAACATCCCTGCCG 42396
Query 364976 ATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGG 365035
|| | ||| || | ||||| || || ||||| ||||| |||| | | | ||||
Sbjct 42395 ATATCAAGGCTCTGTACAAGACTGTGTGGGAGATTTCTCAGCGACAGGTTGTGCAGATGG 42336
Query 365036 CGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGC 365095
| || || || ||||| || ||| ||| ||||| | ||| | ||||| | |
Sbjct 42335 CTGCGGACCGTGGTGCCTTCATCGACCAGTCTCAGTCTCTCAACATTCACATGAAGGACC 42276
Query 365096 CAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAG 365155
| || | |||| | || |||||| ||| || ||||| |||||| ||||| |
Sbjct 42275 CTACAATGGGCAAGATCACCAGCATGCACTTCGCTGGCTGGAAGCTCGGTCTCAAGACCG 42216
Query 365156 G 365156
|
Sbjct 42215 G 42215
>seq221
Length=98460
Score = 91.5 bits (100), Expect = 4e-13
Identities = 148/210 (70%), Gaps = 5/210 (2%)
Strand=Plus/Plus
Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACG-TTCATTCGCGGAACG 22493
|| ||||| |||||||| | |||||| | |||| |||| ||| || || | ||
Sbjct 72113 AAGAAGGCGGATTGGGCCATCCGATGGATCCAGGACAA-GAACTCTTCCTTTGCTCAGCG 72171
Query 22494 TCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTT 22553
|||| | || ||||||| ||||| || || ||||| ||| || ||| | | |||||
Sbjct 72172 TCTTGTAGCTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTT 72231
Query 22554 TTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCG 22613
||||| || || || | | ||||| ||||| | ||||| || ||| | || ||
Sbjct 72232 CTGGCTCAAGAAGCGCGGCCTCATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCG 72291
Query 22614 AGATGAGGGTCTTCATACCGATTTTGCGTG 22643
|||||||||||||| || || ||||| ||
Sbjct 72292 TGATGAGGGTCTTCACACTGACTTTGCCTG 72321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303345567676142
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |