Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq174 118 9e-22 seq61 86.0 5e-12 >seq174 Length=222900 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || | || ||| |||| |||||| | | Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| ||||| || ||||| || || || || Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||||| || ||||||||||||||| |||| | ||| | || ||| || ||| Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 ||||| || ||||| ||| | ||| | ||| Sbjct 54329 ATTCAGAAGGAATCCACACTCCATCTCGTG 54300 >seq61 Length=421038 Score = 86.0 bits (94), Expect = 5e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| |||| |||||| | ||||||||||| | ||||| ||||| ||| Sbjct 258578 ATCACCCTCGAGGTCGAGTCTTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 258637 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || || ||||| || || ||||| ||| || |||| | || ||||||||| ||||| ||| Sbjct 258638 AAGGAGGGCATCCCCCCGGATCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGAT 258697 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | ||| | || ||| || ||||| || || Sbjct 258698 GGCCGAACCCTCTCCGACTACAACATCCAGAA 258729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429933479634555