Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_007383.1
Length=134394
Score E
Sequences producing significant alignments: (Bits) Value
seq174 118 9e-22
seq61 86.0 5e-12
>seq174
Length=222900
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050
||||| | || || || || | || || || | || ||| |||| |||||| | |
Sbjct 54509 ATGCAGATCTTCGTCAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCC 54450
Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110
||||||||||| | ||||| |||||| ||||| || ||||| || || || ||
Sbjct 54449 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCTGACCAG 54390
Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170
||| || |||||| || ||||||||||||||| |||| | ||| | || ||| || |||
Sbjct 54389 CAGCGATTGATTTTCGCCGGCAAGCAACTCGAGGATGGCCGAACCCTCTCCGACTACAAC 54330
Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200
||||| || ||||| ||| | ||| | |||
Sbjct 54329 ATTCAGAAGGAATCCACACTCCATCTCGTG 54300
>seq61
Length=421038
Score = 86.0 bits (94), Expect = 5e-12
Identities = 110/152 (72%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086
|| ||| |||| |||||| | ||||||||||| | ||||| ||||| |||
Sbjct 258578 ATCACCCTCGAGGTCGAGTCTTCGGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 258637
Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146
|| || ||||| || || ||||| ||| || |||| | || ||||||||| ||||| |||
Sbjct 258638 AAGGAGGGCATCCCCCCGGATCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTCGAGGAT 258697
Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178
| | ||| | || ||| || ||||| || ||
Sbjct 258698 GGCCGAACCCTCTCCGACTACAACATCCAGAA 258729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429933479634555
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |