Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq174 116 3e-21 >seq174 Length=222900 Score = 116 bits (128), Expect = 3e-21 Identities = 155/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| |||| || ||||| ||| Sbjct 54737 ATGCAGATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCCTCGAGGTTGAGTCATCT 54678 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || ||||| ||||| | || | ||| ||||| || || || || |||||||| Sbjct 54677 GATACCATCGACAATGTGAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCTCCTGACCA 54619 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | ||||| |||||||| || | || || | || || | |||||||| Sbjct 54618 GCAGCGATTGATTTTCGCCGGCAAGCAGCTCGAGGACGGCCGAACCCTCTCTGATTACAA 54559 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| || || ||||| || ||| | ||||| Sbjct 54558 TATTCAGAAGGAGTCCACACTCCATCTCGTGCT 54526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325459750015