Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04-
14] 481 sequences; 35,314,756 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq221 150 2e-31
>seq221
Length=98460
Score = 150 bits (166), Expect = 2e-31
Identities = 372/561 (66%), Gaps = 9/561 (2%)
Strand=Plus/Minus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| || || | ||| || || || || || | ||| ||| || | |
Sbjct 72322 GCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAG 72263
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
||| || | || || || ||||||||||| || || |||||||| |||| || ||
Sbjct 72262 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAA 72203
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268
||||| || || || ||||| || |||| ||| | ||||| | || || ||
Sbjct 72202 GATACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAA---GGAAGAGTTCTTGTC 72146
Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| ||||||| | |||||||| || || || || ||||| | || || | ||
Sbjct 72145 CTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGC 72086
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
||| || ||||| |||| | | || ||||| || || || | ||| || ||
Sbjct 72085 GTTGAAGAGGTATGTGCGCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTA 72026
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
|||| || |||| |||||||| || ||||| || ||||| |||| ||| || |
Sbjct 72025 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGG 71966
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
|||||| || || || | ||| ||||| || || ||||| || |||||||| ||
Sbjct 71965 GATCTGGACCTCGCCGCTGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGC 71906
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC---ATCTTTAAGCTTATC 93564
|| || ||||| | || || || || | || ||| || | | | || |
Sbjct 71905 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTT 71846
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| ||||| || || ||||||| || || | ||||| || || || |||||
Sbjct 71845 CCAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGC 71786
Query 93625 TTTTTTGTACATATCCCATAT 93645
|| |||||||| | ||| ||
Sbjct 71785 CTTCTTGTACATTTGCCAGAT 71765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556857451874440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |