Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq221 150 2e-31 >seq221 Length=98460 Score = 150 bits (166), Expect = 2e-31 Identities = 372/561 (66%), Gaps = 9/561 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||| || || || || || | ||| ||| || | | Sbjct 72322 GCAGGCAAAGTCAGTGTGAAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGCTCAG 72263 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | || || || ||||||||||| || || |||||||| |||| || || Sbjct 72262 ACCAGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCACCACTGAAGAA 72203 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| || || || ||||| || |||| ||| | ||||| | || || || Sbjct 72202 GATACCCTCAACAGCAGCAAAAGCTACAAGACGCTGAGCAAA---GGAAGAGTTCTTGTC 72146 Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || ||||||| | |||||||| || || || || ||||| | || || | || Sbjct 72145 CTGGATCCATCGGATGGCCCAATCCGCCTTCTTTCGGATGCAAGGAATGGTGTCAACGGC 72086 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 ||| || ||||| |||| | | || ||||| || || || | ||| || || Sbjct 72085 GTTGAAGAGGTATGTGCGCTGAGCAGGGTCCTTGATGTAGGTGTCAATGAGCAGGGAGTA 72026 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 |||| || |||| |||||||| || ||||| || ||||| |||| ||| || | Sbjct 72025 TGTTTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCATCGAGCCTCGGG 71966 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 |||||| || || || | ||| ||||| || || ||||| || |||||||| || Sbjct 71965 GATCTGGACCTCGCCGCTGAAACGCTCAACGAGGTTCTCGTTGACGATGCCATCGGAGGC 71906 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC---ATCTTTAAGCTTATC 93564 || || ||||| | || || || || | || ||| || | | | || | Sbjct 71905 AGCGAAGAAAGCAAGAATGTGGGAGATGAAGTATTGCTCGTCTGAAGTCAGACGGTTGTT 71846 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| ||||| || || ||||||| || || | ||||| || || || ||||| Sbjct 71845 CCAGTCGTGAAGATCCTTGGAGAGATCGATCTCCTCAGCTGTCCAGAAGGAAGCCTCTGC 71786 Query 93625 TTTTTTGTACATATCCCATAT 93645 || |||||||| | ||| || Sbjct 71785 CTTCTTGTACATTTGCCAGAT 71765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857451874440