Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Fusarium_20praegraminearum_20[genbank_20GCA_5F002093855.1_202017-04- 14] 481 sequences; 35,314,756 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq51 327 2e-84 seq221 302 8e-77 >seq51 Length=398837 Score = 327 bits (362), Expect = 2e-84 Identities = 1107/1714 (65%), Gaps = 59/1714 (3%) Strand=Plus/Plus Query 243737 ACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCTTG 243796 ||| ||||||||| ||| ||| | || |||| || | ||||||||||||||||||||| Sbjct 42164 ACGGTGAACTGGATGGGGGCGGCAGCAGCCTGTGTACGGAGGTAGTACATGCCGGTCTTG 42223 Query 243797 AGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTGGG 243856 || || |||| | || ||||||| || | ||| ||| || | ||| Sbjct 42224 AGACCGAGCTTCCAGCCAGCGAAGTGCATGCTGGTGATCTTGCCCAT--TG----TAGGG 42277 Query 243857 TCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCTCT 243916 || | | | ||| | ||||| ||||| |||||||| ||||| | || || Sbjct 42278 TCCTTCATGT---GAATG---TTGAGAGACTGAGACTGGTCGATGAAGGCACCACGGTCC 42331 Query 243917 GCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTG 243976 || ||||| | | | |||||| ||||| || | |||||||| | | |||| Sbjct 42332 GCAGCCATCTGCACAACCTGTCGCTGAGAAATCTCCCACACAGTCTTGTACAGAGCCTTG 42391 Query 243977 AGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTG 244036 | | | |||| ||||||||| | || || | | |||| || | Sbjct 42392 ATATCGGCAGGGATGTTGGGGATGTTCTGGATAGAACCACCATCAGCAATGATACGGTTC 42451 Query 244037 CGCATGTTATCGTTCCACAGGCCCAAGCGCTCCAGCGCCTCGA----CCAGGTGCCTGTT 244092 ||| |||| ||| || |||| | | || ||| || ||||| | || Sbjct 42452 TTCATACCATCGGACCAAAGACCCATGTCGACAAGATCCTTGAGAAGCCAGGGG----TT 42507 Query 244093 CACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTC 244152 || || || ||||| || | || || ||||| ||||||| |||| | || ||||| Sbjct 42508 GACAACTTGGAACTCGCCAGCAAGGACTCGGCGTTGGTAGATGTTGGAGGTGTAGGGCTC 42567 Query 244153 GATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAG 244212 || || ||| ||||||| || ||||||| || || ||||| ||||| || | || || Sbjct 42568 GAAGCACTCGTTGTTGCCAAGAATCTGCGAGGTACTAGCAGTGGGCATAGGAGCAACGAG 42627 Query 244213 CAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCACAT 244272 ||||||||| | | ||||| ||| || || ||| | ||| ||||| | Sbjct 42628 CAGACTGTTGCGGATACCGTGAGTCTTGACATCCTCTCGGAGAGATTCCCACTCCCAAAG 42687 Query 244273 GCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGAC 244332 | ||||| | | | || |||||| |||||||| || | |||| | | Sbjct 42688 ATC--AGAGGGCTTGACATT-------CCACATATCAAACTGGAGAATGCCCTCAGAGGC 42738 Query 244333 GGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTT-ACAGCTCTCGT 244391 || ||||| | |||| | ||||||||| || || ||| |||| |||| | || Sbjct 42739 AGGAGAGCCCTTGAAGGTGGAGTAGGGACCCTCCTCCTTGGCGAGCTGCACAGAGGTAGT 42798 Query 244392 CGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGC 244451 ||||| |||| || || ||||||||||| |||||||| || || |||| | Sbjct 42799 A-AGGGCAGCGTGATAAATAGTCTCGAAGATTTGCTTGTTCAGCTCACGAGCCTCGGGAG 42857 Query 244452 AGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGA 244511 | ||||| |||| | | |||| | || || || || || || |||| || | Sbjct 42858 ACTCAAAGGGCATGCGGAGAGCAAGGAAGGCATCAGCAAGACCTTGGACACCGAGACCAA 42917 Query 244512 TGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGA 244571 |||||| ||| ||| ||||| | || || | || ||||| |||| |||||| Sbjct 42918 TGGGTCGGTGACGCATGTTGCTGTTGCGAGCCTCTTGAACAGGGTAGTGGTTGACGTCGA 42977 Query 244572 TCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGT 244631 | | |||||| | ||||||| | | | ||| ||| ||| || ||||||| Sbjct 42978 TAATCTTGTTCAAGTTGCGGACAACGACTTGAGTGACTTCGTGTAGCTTCTTGAAGTCGT 43037 Query 244632 ACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCA 244691 | | | | ||| || | || ||| | || | || | | | ||| | Sbjct 43038 A---GCAAGCATCTTCATAGTTGATGA-----AAGAAGGC----AGAGACAAGGAGGCAA 43085 Query 244692 GGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTAC 244751 ||||||| ||||| ||||| || | | | ||||| | |||||| ||||| ||||| Sbjct 43086 GGTTGCAAACGGCGACCTCATCAGGGGCGCAGTACTCAATAATCTCAGTGCACAGGTTGG 43145 Query 244752 TGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGA 244811 || |||||| || |||| || || ||| |||| ||||||| |||||||||| Sbjct 43146 AGCTTCGGATGGTACCAAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGA 43205 Query 244812 GCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAG 244871 |||||||||| |||||||| |||||| |||| | | || ||| || | || Sbjct 43206 GCATGAAGGGGTTTCCGGTCTCTGTCTGGGCCTCGAGAATGGCGTACCAAAGTTTTTGAG 43265 Query 244872 CCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTCGAACT 244931 |||||| | | ||||| ||||||||||| |||||| |||||| ||||| |||| Sbjct 43266 CCTTGATAGACTTGCGACCCTTGCCCTCTCTCTCGTACTTTTCGTACAGAGCCTCAAACT 43325 Query 244932 CGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTCCACTCGC 244991 | || || || | || || |||||| |||||||| ||| |||| |||| Sbjct 43326 CATCACCGTAGCAGTCAGCAAGACCAGGGCACTCGTTGGGGCACATAAGAGTCCATTCGC 43385 Query 244992 CGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCC 245051 || | || ||| | || ||||||||| || |||||||| || || |||| ||||| | Sbjct 43386 CGTTCTTCTCGACACGCTTCATGAAGAGATCAGGGATCCAAAGAGCGAGGAACAGGTCAC 43445 Query 245052 TGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGA 245111 | | ||| ||| || |||||| | || || | || || ||||||||| Sbjct 43446 GAGCGCGGACCTCCTCCTTACCGTGGTTCTTTCGGAGATCAAGGAACTCGAAGACGTCGG 43505 Query 245112 CGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCA 245171 ||||||| ||||| | ||| | |||| ||| ||||| |||||||| || |||||||| | Sbjct 43506 CGTGCCATGGCTCAAGGTAAATGGCGAAGGCACCGGGTCGCTTGTTACCACCCTGGTCGA 43565 Query 245172 CCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGG 245227 | | ||||| |||||| | ||||| | || || || ||||| || Sbjct 43566 ----CGTAACGAGCAGTGTTGTTGAACACACGCAGCATGGGAACGATACCGTTGGAAGTA 43621 Query 245228 CCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCC 245283 || ||||| || |||||| | ||| || | | || || | ||| ||| ||| Sbjct 43622 CCATTGGTACCGGCGATGTAAGAGCCAGTGGCACGGA--TT--CGGTGGGCATTCAAGCC 43677 Query 245284 TAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTC 245343 | || || || |||||| || | ||| || |||||| || || || || || Sbjct 43678 AATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGAGTATCGTAGATACCATC 43737 Query 245344 CATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCA 245403 ||||||||| |||||| | | || ||||| || || || || |||| ||| | | Sbjct 43738 AATGCTGTCCTCCTTCATATCAACAAGGAAGCATGATGATAGTTGAGGCTGTGGGGTACC 43797 Query 245404 CGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 | |||||| | ||||||||| || || || ||| Sbjct 43798 GGCGTTGAATAAAGTGGGGCTCGCATGAGTGAAG 43831 >seq221 Length=98460 Score = 302 bits (334), Expect = 8e-77 Identities = 594/863 (69%), Gaps = 34/863 (4%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| |||||| || |||||||| || || Sbjct 71765 ATCTGGCAAATGTACAAGAAGGCAGAGGCTTCCTTCTGGACAGCTGAGGAGATCGATCTC 71824 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGA----ACGAAAAGTTTTTCCTCAA 42415 ||||||| || |||| | || |||||| |||| | | ||| || Sbjct 71825 TCCAAGGATCTTCACGACTGGAACA-ACCGTCTGACTTCAGACGAGCAATACTTCATCTC 71883 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || || |||||||| ||||| || ||||| ||||| |||||||| | | Sbjct 71884 CCACATTCTTGCTTTCTTCGCTGCCTCCGATGGCATCGTCAACGAGAACCTCGTTGAGCG 71943 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 |||| ||||| ||| | ||||| || |||||||| ||||||||||| || Sbjct 71944 TTTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGATGCTTCTATGGCTTCCAGATCATGAT 72003 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCA---ACACGTACATCCTGGATCC 42592 |||||| | ||||| || ||| || ||||||| |||| |||||| ||| || Sbjct 72004 GGAGAACATCCACTCCGAAACATACTCC---CTGCTCATTGACACCTACATCAAGGACCC 72060 Query 42593 CGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGC 42652 | |||| | || ||||| ||| | || || || || |||||| |||||||| Sbjct 72061 TGCTCAGCGCACATACCTCTTCAACGCCGTTGACACCATTCCTTGCATCCGAAAGAAGGC 72120 Query 42653 GGACTGGGCGCTCAACTGGATCGAGAGTCCCGA-CGCAACGTTCGGCGAGAGGCTGGTAG 42711 ||| ||||| || |||||| || | | || | | | || | || | || |||| Sbjct 72121 GGATTGGGCCATCCGATGGATCCAG-GACAAGAACTCTTCCTTTGCTCAGCGTCTTGTAG 72179 Query 42712 CCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCA 42771 | ||| | || || ||||| ||||||||| || ||||| || |||||||||||||||| Sbjct 72180 CTTTTGCTGCTGTTGAGGGTATCTTCTTCAGTGGTGCCTTTGCTTCCATCTTCTGGCTCA 72239 Query 42772 AGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 || || || || ||||| || || | ||| || ||||| |||||| | || ||| Sbjct 72240 AGAAGCGCGGCCTC-ATGCCTGGTCTGAGCTTTTCCAACGAGCTCATCTCTCGTGATGAG 72298 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC-AGGCACAAGCCCTC 42889 || || || | ||||||||||||||||| ||| |||||| ||| || ||| | Sbjct 72299 GGTCTTCACACTGACTTTGCCTGCCTCCTTCACTC---TCACCTCAAGGGACGTGCCAGC 72355 Query 42890 GAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 || || | | | || || ||||| || ||||| || ||| |||||||||| || Sbjct 72356 -AAACAGATGATTCAGGAAATTATCACCGATGCCGTTACCATTGAGCAGGAGTTCCTTAC 72414 Query 42950 GCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCC 43008 || | || ||| ||| | ||| ||||||||||| | |||||||| |||||||| Sbjct 72415 TGAGGCTCT-CCCTTGTGCTCTGCTCGGCATGAACTCCAACCTCATGAAGCAGTACATCG 72473 Query 43009 AGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCTCTACAACA 43062 ||| |||||| || | |||||| | | |||| || || | ||||| Sbjct 72474 AGTTCGTCGCTGATCGTCTCCT------CGTCGCTCTCGGCAACGAGAAGGTGTACAAGG 72527 Query 43063 CGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCG 43122 | | |||||||||||| |||||||||||||| | | |||||||||||||| |||| Sbjct 72528 CTACCAACCCCTTCGACTTCATGGAGAACATCTCTCTTGGCGGCAAGACCAACTTCTTCG 72587 Query 43123 AGAAGCGCGTCGCCGACTACCAG 43145 ||||||| || || ||||||||| Sbjct 72588 AGAAGCGTGTTGCTGACTACCAG 72610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333522160560